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Mechanism of threonine ADP-ribosylation of F-actin by a Tc toxin

View ORCID ProfileAlexander Belyy, View ORCID ProfileFlorian Lindemann, View ORCID ProfileDaniel Roderer, View ORCID ProfileJohanna Funk, View ORCID ProfileBenjamin Bardiaux, View ORCID ProfileJonas Protze, View ORCID ProfilePeter Bieling, View ORCID ProfileHartmut Oschkinat, View ORCID ProfileStefan Raunser
doi: https://doi.org/10.1101/2022.05.06.490871
Alexander Belyy
1Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Otto-Hahn-Str. 11, 44227 Dortmund, Germany
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Florian Lindemann
2Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Robert-Rössle-Str. 10, 13125 Berlin, Germany
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Daniel Roderer
1Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Otto-Hahn-Str. 11, 44227 Dortmund, Germany
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Johanna Funk
3Department of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, Otto-Hahn-Str. 11, 44227 Dortmund, Germany
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Benjamin Bardiaux
4Institut Pasteur, Université Paris Cité, CNRS UMR3528, Structural Bioinformatics Unit, 25-28 Rue du Docteur Roux, F-75015 Paris, France
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Jonas Protze
2Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Robert-Rössle-Str. 10, 13125 Berlin, Germany
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Peter Bieling
3Department of Systemic Cell Biology, Max Planck Institute of Molecular Physiology, Otto-Hahn-Str. 11, 44227 Dortmund, Germany
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Hartmut Oschkinat
2Leibniz-Forschungsinstitut für Molekulare Pharmakologie, Robert-Rössle-Str. 10, 13125 Berlin, Germany
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  • For correspondence: oschkinat@fmp-berlin.de stefan.raunser@mpi-dortmund.mpg.de
Stefan Raunser
1Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Otto-Hahn-Str. 11, 44227 Dortmund, Germany
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  • For correspondence: oschkinat@fmp-berlin.de stefan.raunser@mpi-dortmund.mpg.de
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Abstract

Tc toxins deliver toxic enzymes into host cells by a unique injection mechanism. One of these enzymes is TccC3, an ADP-ribosyltransferase from Photorhabdus luminescens. Once TccC3 is translocated into the target cell, the enzyme ADP-ribosylates actin, resulting in clustering of the actin cytoskeleton and ultimately cell death. Here, we combine biochemistry, solution and solid-state NMR spectroscopy and cryo-EM to show in atomic detail how TccC3 modifies actin. We find that the ADP-ribosyltransferase does not bind to G-actin but interacts with two consecutive actin subunits of F-actin. The binding of TccC3 to F-actin occurs via an induced-fit mechanism that facilitates access of NAD+ to the nucleotide binding pocket. The following nucleophilic substitution reaction results in the transfer of ADP-ribose to threonine-148 of F-actin. We demonstrate that this site-specific modification of F-actin prevents its interaction with depolymerization factors, such as cofilin, which impairs actin network turnover and leads to steady actin polymerization. Our findings reveal in atomic detail a new mechanism of action of a bacterial toxin through specific targeting and modification of F-actin.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted May 06, 2022.
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Mechanism of threonine ADP-ribosylation of F-actin by a Tc toxin
Alexander Belyy, Florian Lindemann, Daniel Roderer, Johanna Funk, Benjamin Bardiaux, Jonas Protze, Peter Bieling, Hartmut Oschkinat, Stefan Raunser
bioRxiv 2022.05.06.490871; doi: https://doi.org/10.1101/2022.05.06.490871
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Mechanism of threonine ADP-ribosylation of F-actin by a Tc toxin
Alexander Belyy, Florian Lindemann, Daniel Roderer, Johanna Funk, Benjamin Bardiaux, Jonas Protze, Peter Bieling, Hartmut Oschkinat, Stefan Raunser
bioRxiv 2022.05.06.490871; doi: https://doi.org/10.1101/2022.05.06.490871

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