Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Cryo-EM structure of gas vesicles for buoyancy-controlled motility

Stefan T. Huber, Dion Terwiel, Wiel H. Evers, David Maresca, View ORCID ProfileArjen J. Jakobi
doi: https://doi.org/10.1101/2022.05.08.489936
Stefan T. Huber
aDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Dion Terwiel
bDepartment of Imaging Physics, Delft University of Technology, Delft, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Wiel H. Evers
aDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
David Maresca
bDepartment of Imaging Physics, Delft University of Technology, Delft, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: a.jakobi@tudelft.nl d.maresca@tudelft.nl
Arjen J. Jakobi
aDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Arjen J. Jakobi
  • For correspondence: a.jakobi@tudelft.nl d.maresca@tudelft.nl
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Data/Code
  • Preview PDF
Loading

Abstract

Gas vesicles allow a diverse group of bacteria and archaea to move in the water column by controlling their buoyancy (1). These gas-filled cellular nanocompartments are formed by up to micrometers long protein shells that are permeable only to gas. The molecular basis of their unique properties and mechanism of assembly remains unknown. Here, we solve the 3.2 Å cryo-EM structure of the B.megaterium gas vesicle shell made from the structural protein GvpA that self-assembles into hollow helical cylinders closed off by cone-shaped tips. Remarkably, the unique fold adopted by GvpA generates a corrugated cylinder surface typically found in force-bearing thin-walled structures. We identified pores in the vesicle wall that enable gas molecules to freely diffuse in and out of the GV shell, while the exceptionally hydrophobic interior surface effectively repels water. Our results show that gas vesicles consist of two helical half-shells connected through a unique arrangement of GvpA monomers, suggesting a mechanism of gas vesicle biogenesis. Comparative structural analysis confirms the evolutionary conservation of gas vesicle assemblies and reveals molecular details of how the secondary structural protein GvpC reinforces the GvpA shell. Our findings provide a structural framework that will further research into the biology of gas vesicles, and enable rational molecular engineering to harness their unique properties for acoustic imaging (2, 3).

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://www.ebi.ac.uk/pdbe/entry/emdb/14238

  • https://www.ebi.ac.uk/pdbe/entry/emdb/14340

  • https://www.ebi.ac.uk/pdbe/entry/pdb/7r1c

  • https://doi.org/10.5281/zenodo.6458345

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted May 09, 2022.
Download PDF

Supplementary Material

Data/Code
Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Cryo-EM structure of gas vesicles for buoyancy-controlled motility
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Cryo-EM structure of gas vesicles for buoyancy-controlled motility
Stefan T. Huber, Dion Terwiel, Wiel H. Evers, David Maresca, Arjen J. Jakobi
bioRxiv 2022.05.08.489936; doi: https://doi.org/10.1101/2022.05.08.489936
Digg logo Reddit logo Twitter logo Facebook logo Google logo LinkedIn logo Mendeley logo
Citation Tools
Cryo-EM structure of gas vesicles for buoyancy-controlled motility
Stefan T. Huber, Dion Terwiel, Wiel H. Evers, David Maresca, Arjen J. Jakobi
bioRxiv 2022.05.08.489936; doi: https://doi.org/10.1101/2022.05.08.489936

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One
Subject Areas
All Articles
  • Animal Behavior and Cognition (3482)
  • Biochemistry (7329)
  • Bioengineering (5301)
  • Bioinformatics (20212)
  • Biophysics (9985)
  • Cancer Biology (7706)
  • Cell Biology (11273)
  • Clinical Trials (138)
  • Developmental Biology (6425)
  • Ecology (9923)
  • Epidemiology (2065)
  • Evolutionary Biology (13292)
  • Genetics (9353)
  • Genomics (12559)
  • Immunology (7681)
  • Microbiology (18964)
  • Molecular Biology (7421)
  • Neuroscience (40915)
  • Paleontology (298)
  • Pathology (1226)
  • Pharmacology and Toxicology (2130)
  • Physiology (3145)
  • Plant Biology (6842)
  • Scientific Communication and Education (1271)
  • Synthetic Biology (1893)
  • Systems Biology (5299)
  • Zoology (1086)