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Accelerating the clock: Interconnected speedup of energetic and molecular dynamics during aging in cultured human cells

View ORCID ProfileGabriel Sturm, View ORCID ProfileNatalia Bobba-Alves, View ORCID ProfileRobert A. Tumasian III, View ORCID ProfileJeremy Michelson, View ORCID ProfileLuigi Ferrucci, Christopher P. Kempes, View ORCID ProfileMartin Picard
doi: https://doi.org/10.1101/2022.05.10.491392
Gabriel Sturm
1Department of Psychiatry, Division of Behavioral Medicine, Columbia University Irving Medical Center, New York, NY, United States
2Department of Biophysics and Biochemistry, University of California, San Francisco, CA, United States
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Natalia Bobba-Alves
1Department of Psychiatry, Division of Behavioral Medicine, Columbia University Irving Medical Center, New York, NY, United States
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Robert A. Tumasian III
3Department of Biostatistics, Mailman School of Public Health, Columbia University, New York, NY, United States
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Jeremy Michelson
1Department of Psychiatry, Division of Behavioral Medicine, Columbia University Irving Medical Center, New York, NY, United States
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Luigi Ferrucci
4Intramural Research Program of the National Institute on Aging, NIH, Baltimore, Maryland, United States of America
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Christopher P. Kempes
5Santa Fe Institute, Santa Fe, NM, United States
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  • For correspondence: ckempes@gmail.com martin.picard@columbia.edu
Martin Picard
1Department of Psychiatry, Division of Behavioral Medicine, Columbia University Irving Medical Center, New York, NY, United States
6Department of Neurology, H. Houston Merritt Center, Columbia Translational Neuroscience Initiative, Columbia University Irving Medical Center, New York, NY, United States
7New York State Psychiatric Institute, New York, NY, United States
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  • For correspondence: ckempes@gmail.com martin.picard@columbia.edu
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Abstract

The allometric theory of metabolism predicts that the rate of biological aging is proportional to an organism’s size and metabolic rate (MR). Here we test this hypothesis in humans by generating longitudinal, multi-modal signatures of aging in primary human fibroblasts. Relative to metabolic rates in the human body, isolated cells exhibit markedly elevated MR and operate closer to their maximal energy production capacity. Accordingly, per-cell division, isolated cells display accelerated telomere shortening and increased rate of DNA methylation aging. Moreover, despite a marked reduction in division rate towards the end of life, mass-specific MR increases exponentially, reflecting hypermetabolism. We develop a theoretical-mathematical model that accounts for a partitioning of energetic costs related to both growth or maintenance, quantifying the potential origins of hypermetabolism in vitro, and with advancing age. Moreover, we define genome-wide molecular rescaling factors that confirm and quantify the systematic acceleration of molecular aging kinetics in cultured fibroblasts, and use this approach to show how metabolic and pharmacological manipulations that increase or decrease MR predictably accelerate or decelerate the rates of biological aging. The interconnected speedup of energetic and molecular dynamics across the lifespan of human cells has important theoretical and clinical implications for aging biology.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://columbia-picard.shinyapps.io/shinyapp-Lifespan_Study/

  • https://github.com/gav-sturm/Cellular_Lifespan_Study

  • https://figshare.com/articles/dataset/Lifespan_Study_Data/18441998

  • https://www.biorxiv.org/content/10.1101/2021.11.12.468448

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted May 12, 2022.
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Accelerating the clock: Interconnected speedup of energetic and molecular dynamics during aging in cultured human cells
Gabriel Sturm, Natalia Bobba-Alves, Robert A. Tumasian III, Jeremy Michelson, Luigi Ferrucci, Christopher P. Kempes, Martin Picard
bioRxiv 2022.05.10.491392; doi: https://doi.org/10.1101/2022.05.10.491392
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Accelerating the clock: Interconnected speedup of energetic and molecular dynamics during aging in cultured human cells
Gabriel Sturm, Natalia Bobba-Alves, Robert A. Tumasian III, Jeremy Michelson, Luigi Ferrucci, Christopher P. Kempes, Martin Picard
bioRxiv 2022.05.10.491392; doi: https://doi.org/10.1101/2022.05.10.491392

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