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Terminal differentiation and persistence of effector regulatory T cells essential for the prevention of intestinal inflammation

View ORCID ProfileStanislav Dikiy, Andrew G. Levine, Yuri Pritykin, Chirag Krishna, Ariella Glasner, View ORCID ProfileChristina S. Leslie, Alexander Y. Rudensky
doi: https://doi.org/10.1101/2022.05.16.492030
Stanislav Dikiy
1Howard Hughes Medical Institute and Immunology Program, Ludwig Center at Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
2Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY 10021, USA
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  • ORCID record for Stanislav Dikiy
Andrew G. Levine
1Howard Hughes Medical Institute and Immunology Program, Ludwig Center at Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
2Immunology and Microbial Pathogenesis Program, Weill Cornell Graduate School of Medical Sciences, New York, NY 10021, USA
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Yuri Pritykin
3Computational and Systems Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
4Lewis-Sigler Institute for Integrative Genomics and Department of Computer Science, Princeton University, Princeton, NJ 08540, USA
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Chirag Krishna
3Computational and Systems Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
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Ariella Glasner
1Howard Hughes Medical Institute and Immunology Program, Ludwig Center at Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
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Christina S. Leslie
3Computational and Systems Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
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Alexander Y. Rudensky
1Howard Hughes Medical Institute and Immunology Program, Ludwig Center at Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA
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  • For correspondence: rudenska@mskcc.org
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SUMMARY

Regulatory T (Treg) cells represent a specialized CD4+ T cell lineage with essential anti-inflammatory functions. Recent studies of the adaptations of Treg cells to non-lymphoid tissues which enable their specialized immunosuppressive and tissue supportive functions raise questions about the underlying mechanisms of these adaptations and whether they represent stable differentiation or reversible activation states. Using novel genetic tools, we characterized the transcriptional programs of distinct colonic effector Treg cell types. We found that attenuated T cell receptor (TCR) signaling and acquisition of substantial TCR independent functionality appears to facilitate the terminal differentiation of a population of colonic effector Treg cells distinguished by stable expression of immunomodulatory cytokine interleukin-10 (IL-10). Functional studies revealed that this subset of effector Treg cells, but not their expression of IL-10, was indispensable for preventing colitis. These findings suggest core features of terminal differentiation of effector Treg cells in non-lymphoid tissues and their function therein.

Competing Interest Statement

A.Y.R. is an SAB member and has equity in Sonoma Biotherapeutics, RAPT Therapeutics, Surface Oncology, and Vedanta Biosciences, and is an SAB member of BioInvent and a co-inventor or has IP licensed to Takeda that is unrelated to the content of the present study. The remaining authors declare no competing interests.

Footnotes

  • ↵5 Senior author

  • Figure S2 becomes Figure 4; new Figure S2 added. Text updated accordingly. Some updates to methods.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted June 08, 2022.
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Terminal differentiation and persistence of effector regulatory T cells essential for the prevention of intestinal inflammation
Stanislav Dikiy, Andrew G. Levine, Yuri Pritykin, Chirag Krishna, Ariella Glasner, Christina S. Leslie, Alexander Y. Rudensky
bioRxiv 2022.05.16.492030; doi: https://doi.org/10.1101/2022.05.16.492030
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Terminal differentiation and persistence of effector regulatory T cells essential for the prevention of intestinal inflammation
Stanislav Dikiy, Andrew G. Levine, Yuri Pritykin, Chirag Krishna, Ariella Glasner, Christina S. Leslie, Alexander Y. Rudensky
bioRxiv 2022.05.16.492030; doi: https://doi.org/10.1101/2022.05.16.492030

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