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The Wnt/TCF7L1 transcriptional repressor axis drives primitive endoderm formation by antagonizing naive and formative pluripotency

View ORCID ProfileParaskevi Athanasouli, Martina Balli, Anchel De Jaime-Soguero, Annekatrien Boel, Sofia Papanikolaou, Bernard K. van der Veer, Adrian Janiszewski, Annick Francis, Youssef El Laithy, Antonio Lo Nigro, View ORCID ProfileFrancesco Aulicino, Kian Peng Koh, View ORCID ProfileVincent Pasque, Maria Pia Cosma, Catherine Verfaille, An Zwijsen, Bjorn Heindryckx, Christoforos Nikolaou, View ORCID ProfileFrederic Lluis
doi: https://doi.org/10.1101/2022.05.18.492419
Paraskevi Athanasouli
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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  • ORCID record for Paraskevi Athanasouli
Martina Balli
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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Anchel De Jaime-Soguero
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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Annekatrien Boel
2Ghent-Fertility and Stem cell Team (G-FaST), Department of Reproductive Medicine, Ghent University Hospital, 9000, Ghent, Belgium
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Sofia Papanikolaou
3Department of Rheumatology, Clinical Immunology, Medical School, University of Crete, 70013, Heraklion, Greece
4Computational Genomics Group, Institute of Bioinnovation, Biomedical Sciences Research Center “Alexander Fleming”, 16672, Athens, Greece
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Bernard K. van der Veer
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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Adrian Janiszewski
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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Annick Francis
7Department of Cardiovascular Sciences, KU Leuven, 3000, Leuven, Belgium
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Youssef El Laithy
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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Antonio Lo Nigro
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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Francesco Aulicino
5Centre for Genomic Regulation (CRG), Dr Aiguader 88, 08003, Barcelona, Spain
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  • ORCID record for Francesco Aulicino
Kian Peng Koh
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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Vincent Pasque
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
6KU Leuven Institute for Single-Cell Omics (LISCO)
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Maria Pia Cosma
5Centre for Genomic Regulation (CRG), Dr Aiguader 88, 08003, Barcelona, Spain
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Catherine Verfaille
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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An Zwijsen
7Department of Cardiovascular Sciences, KU Leuven, 3000, Leuven, Belgium
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Bjorn Heindryckx
2Ghent-Fertility and Stem cell Team (G-FaST), Department of Reproductive Medicine, Ghent University Hospital, 9000, Ghent, Belgium
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Christoforos Nikolaou
4Computational Genomics Group, Institute of Bioinnovation, Biomedical Sciences Research Center “Alexander Fleming”, 16672, Athens, Greece
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Frederic Lluis
1KU Leuven, Department of Development and Regeneration, Stem Cell Institute, B-3000, Leuven, Belgium
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  • ORCID record for Frederic Lluis
  • For correspondence: Frederic.lluisvinas@kuleuven.be
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Abstract

Early during preimplantation development and in heterogeneous mouse embryonic stem cells (mESC) culture, pluripotent cells are specified towards either the primed epiblast or the primitive endoderm (PE) lineage. Canonical Wnt signaling is crucial for safeguarding naive pluripotency and embryo implantation, yet the role and relevance of canonical Wnt inhibition during early mammalian development remains unknown. Here, we demonstrate that transcriptional repression exerted by Wnt/TCF7L1 promotes PE differentiation of mESCs and in preimplantation inner cell mass. Time-series RNA sequencing and promoter occupancy data reveal that TCF7L1 binds and represses genes encoding essential naive pluripotency factors and indispensable regulators of the formative pluripotency program, including Otx2 and Lef1. Consequently, TCF7L1 promotes pluripotency exit and suppresses epiblast lineage formation, thereby driving cells into PE specification. Conversely, deletion of Tcf7l1 abrogates PE differentiation without restraining epiblast priming. Taken together, our study underscores the importance of transcriptional Wnt inhibition in regulating lineage segregation in ESCs and preimplantation embryo development as well as identifies TCF7L1 as key regulator of this process.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵* email: anchel.dejaime{at}cos.uni-heidelberg.de

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted May 19, 2022.
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The Wnt/TCF7L1 transcriptional repressor axis drives primitive endoderm formation by antagonizing naive and formative pluripotency
Paraskevi Athanasouli, Martina Balli, Anchel De Jaime-Soguero, Annekatrien Boel, Sofia Papanikolaou, Bernard K. van der Veer, Adrian Janiszewski, Annick Francis, Youssef El Laithy, Antonio Lo Nigro, Francesco Aulicino, Kian Peng Koh, Vincent Pasque, Maria Pia Cosma, Catherine Verfaille, An Zwijsen, Bjorn Heindryckx, Christoforos Nikolaou, Frederic Lluis
bioRxiv 2022.05.18.492419; doi: https://doi.org/10.1101/2022.05.18.492419
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The Wnt/TCF7L1 transcriptional repressor axis drives primitive endoderm formation by antagonizing naive and formative pluripotency
Paraskevi Athanasouli, Martina Balli, Anchel De Jaime-Soguero, Annekatrien Boel, Sofia Papanikolaou, Bernard K. van der Veer, Adrian Janiszewski, Annick Francis, Youssef El Laithy, Antonio Lo Nigro, Francesco Aulicino, Kian Peng Koh, Vincent Pasque, Maria Pia Cosma, Catherine Verfaille, An Zwijsen, Bjorn Heindryckx, Christoforos Nikolaou, Frederic Lluis
bioRxiv 2022.05.18.492419; doi: https://doi.org/10.1101/2022.05.18.492419

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