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Dynamic bimodality of curli expression in planktonic cultures of Escherichia coli is stabilized by cyclic-di-GMP regulation

Olga Lamprecht, Maryia Ratnikava, Paulina Jacek, Eugen Kaganovitch, Nina Buettner, Kirstin Fritz, Robin Köhler, View ORCID ProfileJulian Pietsch, View ORCID ProfileVictor Sourjik
doi: https://doi.org/10.1101/2022.05.23.493020
Olga Lamprecht
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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Maryia Ratnikava
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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Paulina Jacek
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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Eugen Kaganovitch
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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Nina Buettner
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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Kirstin Fritz
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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Robin Köhler
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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Julian Pietsch
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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  • ORCID record for Julian Pietsch
Victor Sourjik
1Max Planck Institute for Terrestrial Microbiology and Center for Synthetic Microbiology (SYNMIKRO), Karl-von-Frisch Strasse 16, 35043 Marburg, Germany
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  • ORCID record for Victor Sourjik
  • For correspondence: victor.sourjik@synmikro.mpi-marburg.mpg.de
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Abstract

Curli amyloid fibers are major constituent of the extracellular biofilm matrix formed by bacteria of the Enterobacteriaceae family. Within Escherichia coli biofilms, curli gene expression is limited to a subpopulation of bacteria, leading to heterogeneity of extracellular matrix synthesis. Here we show that bimodal activation of curli expression also occurs in well-mixed planktonic cultures of E. coli, resulting in stochastic differentiation into distinct subpopulations of curli-positive and curli-negative cells at the entry into the stationary phase of growth. Monitoring curli activation in individual E. coli cells growing in a microfluidic device revealed that the curli-positive state is only metastable and it can spontaneously revert during continuous growth in a conditioned medium. The regulation by c-di-GMP is not required for curli gene activation or for differentiation of E. coli in subpopulations of curli-producing and curli-negative cells. Instead, we observe that c-di-GMP modulates the probability and dynamics of stochastic curli activation and enhances stability of the curli-positive state.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted May 23, 2022.
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Dynamic bimodality of curli expression in planktonic cultures of Escherichia coli is stabilized by cyclic-di-GMP regulation
Olga Lamprecht, Maryia Ratnikava, Paulina Jacek, Eugen Kaganovitch, Nina Buettner, Kirstin Fritz, Robin Köhler, Julian Pietsch, Victor Sourjik
bioRxiv 2022.05.23.493020; doi: https://doi.org/10.1101/2022.05.23.493020
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Dynamic bimodality of curli expression in planktonic cultures of Escherichia coli is stabilized by cyclic-di-GMP regulation
Olga Lamprecht, Maryia Ratnikava, Paulina Jacek, Eugen Kaganovitch, Nina Buettner, Kirstin Fritz, Robin Köhler, Julian Pietsch, Victor Sourjik
bioRxiv 2022.05.23.493020; doi: https://doi.org/10.1101/2022.05.23.493020

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