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Decreased miRNA-148a-3p expression in skeletal muscle of patients with chronic kidney disease

KA Robinson, LA Baker, MPM Graham-Brown, RU Ashford, Izabella Pawlyckz, View ORCID ProfileRW Major, JO Burton, N. Sylvius, A Cooper, A Philp, EL Watson
doi: https://doi.org/10.1101/2022.05.24.493194
KA Robinson
1Department of Respiratory Sciences, College of Life Sciences, University of Leicester, UK
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LA Baker
2Department of Health Sciences, College of Life Sciences, George Davies Centre, University of Leicester, UK
3NIHR Leicester-Loughborough Diet, Lifestyle and Physical Activity Biomedical Research Unit, Leicester, UK
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MPM Graham-Brown
4Department of Cardiovascular Sciences, University of Leicester and NIHR Leicester Cardiovascular Biomedical Research Centre, Glenfield Hospital Leicester, UK
5John Walls Renal Unit, Leicester General Hospital, University Hospitals of Leicester, Leicester, UK
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RU Ashford
4Department of Cardiovascular Sciences, University of Leicester and NIHR Leicester Cardiovascular Biomedical Research Centre, Glenfield Hospital Leicester, UK
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Izabella Pawlyckz
4Department of Cardiovascular Sciences, University of Leicester and NIHR Leicester Cardiovascular Biomedical Research Centre, Glenfield Hospital Leicester, UK
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RW Major
2Department of Health Sciences, College of Life Sciences, George Davies Centre, University of Leicester, UK
5John Walls Renal Unit, Leicester General Hospital, University Hospitals of Leicester, Leicester, UK
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  • ORCID record for RW Major
JO Burton
4Department of Cardiovascular Sciences, University of Leicester and NIHR Leicester Cardiovascular Biomedical Research Centre, Glenfield Hospital Leicester, UK
5John Walls Renal Unit, Leicester General Hospital, University Hospitals of Leicester, Leicester, UK
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N. Sylvius
1Department of Respiratory Sciences, College of Life Sciences, University of Leicester, UK
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A Cooper
1Department of Respiratory Sciences, College of Life Sciences, University of Leicester, UK
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A Philp
7Mitochondrial Metabolism and Ageing Laboratory, Diabetes and Metabolism Division, Garvan Institute of Medical Research, Darlinghurst, Australia
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EL Watson
3NIHR Leicester-Loughborough Diet, Lifestyle and Physical Activity Biomedical Research Unit, Leicester, UK
4Department of Cardiovascular Sciences, University of Leicester and NIHR Leicester Cardiovascular Biomedical Research Centre, Glenfield Hospital Leicester, UK
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  • For correspondence: emma.watson@leicester.ac.uk
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Abstract

Introduction Skeletal muscle wasting is a common complication of chronic kidney disease which leads to a loss of muscle function. The pathogenesis of skeletal muscle wasting is incompletely understood, which is preventing the development of targeted therapeutics. Recent evidence implicates miRNAs in the of skeletal muscle wasting. Our aim was to firstly examine miRNA profiles of CKD human skeletal muscle for the identification of aberrant expression patterns compared to a healthy control (HC) cohort, and secondly, investigate the role these miRNAs may play in inducing or promoting skeletal muscle atrophy using a novel human primary skeletal muscle cell model of CKD skeletal muscle.

Methods For the comparison between CKD and HC populations, skeletal muscle biopsies were collected from the vastus lateralis of n=15 non-dialysis dependent CKD patient’s stage 3b-5 CKD patients, and n=15 healthy controls matched for age, gender and physical activity. n=5 biopsies from each group underwent next generation sequencing to obtain complete microRNA profiles in CKD vs HC cohorts, which were then validated in a separate cohort by PCR (N=10 in each group). A causative role in muscle wasting was determined by transfection of key microRNAs into a primary culture model of CKD skeletal muscle and changes in protein degradation determined by L-[3H]- phenylalanine release into the media.

Results Next Generation Sequencing identified differential expression of 16 miRNAs in skeletal muscle of CKD patients versus controls, and PCR validation confirmed miRNA-148a-3p expression was significantly decreased in CKD patients. The reduced miRNA-148a-3p expression was also maintained in the primary culture model. Upon overexpression of miRNA-148a-3p in CKD myotubes, protein degradation rates were decreased non-significantly (p=0.28) by 16.3% compared to un-transfected CKD cells.

Conclusion CKD was associated with a significant reduction in miRNA-148a-3p expression in skeletal muscle compared to non-CKD controls which was retained in our in vitro model. Overexpression of miRNA-148a-3p in primary skeletal myotubes non-significantly decreased muscle protein degradation by 16.3%. In order to determine the importance of miRNA-148a-regulation of protein degradation, a deeper understanding of miRNA-148a-3p targets and their associated pathways with respect to those dysregulated in skeletal muscle wasting is required.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted May 24, 2022.
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Decreased miRNA-148a-3p expression in skeletal muscle of patients with chronic kidney disease
KA Robinson, LA Baker, MPM Graham-Brown, RU Ashford, Izabella Pawlyckz, RW Major, JO Burton, N. Sylvius, A Cooper, A Philp, EL Watson
bioRxiv 2022.05.24.493194; doi: https://doi.org/10.1101/2022.05.24.493194
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Decreased miRNA-148a-3p expression in skeletal muscle of patients with chronic kidney disease
KA Robinson, LA Baker, MPM Graham-Brown, RU Ashford, Izabella Pawlyckz, RW Major, JO Burton, N. Sylvius, A Cooper, A Philp, EL Watson
bioRxiv 2022.05.24.493194; doi: https://doi.org/10.1101/2022.05.24.493194

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