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Virological characteristics of the novel SARS-CoV-2 Omicron variants including BA.2.12.1, BA.4 and BA.5
Izumi Kimura, Daichi Yamasoba, Tomokazu Tamura, Naganori Nao, Yoshitaka Oda, Shuya Mitoma, Jumpei Ito, Hesham Nasser, Jiri Zahradnik, Keiya Uriu, Shigeru Fujita, Yusuke Kosugi, Lei Wang, Masumi Tsuda, Mai Kishimoto, Hayato Ito, Rigel Suzuki, Ryo Shimizu, MST Monira Begum, Kumiko Yoshimatsu, Jiei Sasaki, Kaori Sasaki-Tabata, Yuki Yamamoto, Tetsuharu Nagamoto, Jun Kanamune, Kouji Kobiyama, Hiroyuki Asakura, Mami Nagashima, Kenji Sadamasu, Kazuhisa Yoshimura, Jin Kuramochi, Gideon Schreiber, View ORCID ProfileKen J Ishii, Takao Hashiguchi, The Genotype to Phenotype Japan (G2P-Japan) Consortium, Terumasa Ikeda, View ORCID ProfileAkatsuki Saito, Takasuke Fukuhara, View ORCID ProfileShinya Tanaka, Keita Matsuno, Kei Sato
doi: https://doi.org/10.1101/2022.05.26.493539
Izumi Kimura
1Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
Daichi Yamasoba
1Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
2Faculty of Medicine, Kobe University, Kobe, Japan
Tomokazu Tamura
3Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan
Naganori Nao
4Division of International Research Promotion, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan
5One Health Research Center, Hokkaido University, Sapporo, Japan
Yoshitaka Oda
6Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan
Shuya Mitoma
7Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan
Jumpei Ito
1Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
Hesham Nasser
8Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan
9Department of Clinical Pathology, Faculty of Medicine, Suez Canal University, Ismailia, Egypt
Jiri Zahradnik
10Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel
Keiya Uriu
1Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
11Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
Shigeru Fujita
1Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
11Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
Yusuke Kosugi
1Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
11Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
Lei Wang
6Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan
12Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo, Japan
Masumi Tsuda
6Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan
12Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo, Japan
Mai Kishimoto
13Division of Molecular Pathobiology, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan
Hayato Ito
3Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan
Rigel Suzuki
3Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan
Ryo Shimizu
8Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan
MST Monira Begum
8Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan
Kumiko Yoshimatsu
14Institute for Genetic Medicine, Hokkaido University, Sapporo, Japan
Jiei Sasaki
15Laboratory of Medical Virology, Institute for Life and Medical Sciences, Kyoto University, Kyoto, Japan
Kaori Sasaki-Tabata
16Department of Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, Japan
Yuki Yamamoto
17HiLung Inc., Kyoto, Japan
Tetsuharu Nagamoto
17HiLung Inc., Kyoto, Japan
Jun Kanamune
17HiLung Inc., Kyoto, Japan
Kouji Kobiyama
18Division of Vaccine Science, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
19International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
Hiroyuki Asakura
20Tokyo Metropolitan Institute of Public Health, Tokyo, Japan
Mami Nagashima
20Tokyo Metropolitan Institute of Public Health, Tokyo, Japan
Kenji Sadamasu
20Tokyo Metropolitan Institute of Public Health, Tokyo, Japan
Kazuhisa Yoshimura
20Tokyo Metropolitan Institute of Public Health, Tokyo, Japan
Jin Kuramochi
21Interpark Kuramochi Clinic, Utsunomiya, Japan
Gideon Schreiber
10Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel
Ken J Ishii
18Division of Vaccine Science, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
19International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
Takao Hashiguchi
15Laboratory of Medical Virology, Institute for Life and Medical Sciences, Kyoto University, Kyoto, Japan
Terumasa Ikeda
8Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan
Akatsuki Saito
7Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan
22Center for Animal Disease Control, University of Miyazaki, Miyazaki, Japan
23Graduate School of Medicine and Veterinary Medicine, University of Miyazaki, Miyazaki, Japan
- Find this author on Google Scholar
- Find this author on PubMed
- Search for this author on this site
- ORCID record for Akatsuki Saito
- For correspondence: ikedat@kumamoto-u.ac.jp sakatsuki@cc.miyazaki-u.ac.jp fukut@pop.med.hokudai.ac.jp tanaka@med.hokudai.ac.jp matsuk@czc.hokudai.ac.jp KeiSato@g.ecc.u-tokyo.ac.jp
Takasuke Fukuhara
3Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan
Shinya Tanaka
6Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan
12Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo, Japan
- Find this author on Google Scholar
- Find this author on PubMed
- Search for this author on this site
- ORCID record for Shinya Tanaka
- For correspondence: ikedat@kumamoto-u.ac.jp sakatsuki@cc.miyazaki-u.ac.jp fukut@pop.med.hokudai.ac.jp tanaka@med.hokudai.ac.jp matsuk@czc.hokudai.ac.jp KeiSato@g.ecc.u-tokyo.ac.jp
Keita Matsuno
5One Health Research Center, Hokkaido University, Sapporo, Japan
24International Collaboration Unit, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan
25Division of Risk Analysis and Management, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan
Kei Sato
1Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
11Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
19International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
26International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan
27CREST, Japan Science and Technology Agency, Kawaguchi, Japan
- Figure S1[supplements/493539_file07.tif]
- Figure S2[supplements/493539_file08.tif]
- Figure S3[supplements/493539_file09.tif]
- Table S1[supplements/493539_file10.xlsx]
- Table S2[supplements/493539_file11.xlsx]
- Table S3[supplements/493539_file12.xlsx]
- Table S4[supplements/493539_file13.xlsx]
- Table S5[supplements/493539_file14.xlsx]
- Table S6[supplements/493539_file15.xlsx]
- Table S7[supplements/493539_file16.xlsx]
Posted May 26, 2022.
Virological characteristics of the novel SARS-CoV-2 Omicron variants including BA.2.12.1, BA.4 and BA.5
Izumi Kimura, Daichi Yamasoba, Tomokazu Tamura, Naganori Nao, Yoshitaka Oda, Shuya Mitoma, Jumpei Ito, Hesham Nasser, Jiri Zahradnik, Keiya Uriu, Shigeru Fujita, Yusuke Kosugi, Lei Wang, Masumi Tsuda, Mai Kishimoto, Hayato Ito, Rigel Suzuki, Ryo Shimizu, MST Monira Begum, Kumiko Yoshimatsu, Jiei Sasaki, Kaori Sasaki-Tabata, Yuki Yamamoto, Tetsuharu Nagamoto, Jun Kanamune, Kouji Kobiyama, Hiroyuki Asakura, Mami Nagashima, Kenji Sadamasu, Kazuhisa Yoshimura, Jin Kuramochi, Gideon Schreiber, Ken J Ishii, Takao Hashiguchi, The Genotype to Phenotype Japan (G2P-Japan) Consortium, Terumasa Ikeda, Akatsuki Saito, Takasuke Fukuhara, Shinya Tanaka, Keita Matsuno, Kei Sato
bioRxiv 2022.05.26.493539; doi: https://doi.org/10.1101/2022.05.26.493539
Virological characteristics of the novel SARS-CoV-2 Omicron variants including BA.2.12.1, BA.4 and BA.5
Izumi Kimura, Daichi Yamasoba, Tomokazu Tamura, Naganori Nao, Yoshitaka Oda, Shuya Mitoma, Jumpei Ito, Hesham Nasser, Jiri Zahradnik, Keiya Uriu, Shigeru Fujita, Yusuke Kosugi, Lei Wang, Masumi Tsuda, Mai Kishimoto, Hayato Ito, Rigel Suzuki, Ryo Shimizu, MST Monira Begum, Kumiko Yoshimatsu, Jiei Sasaki, Kaori Sasaki-Tabata, Yuki Yamamoto, Tetsuharu Nagamoto, Jun Kanamune, Kouji Kobiyama, Hiroyuki Asakura, Mami Nagashima, Kenji Sadamasu, Kazuhisa Yoshimura, Jin Kuramochi, Gideon Schreiber, Ken J Ishii, Takao Hashiguchi, The Genotype to Phenotype Japan (G2P-Japan) Consortium, Terumasa Ikeda, Akatsuki Saito, Takasuke Fukuhara, Shinya Tanaka, Keita Matsuno, Kei Sato
bioRxiv 2022.05.26.493539; doi: https://doi.org/10.1101/2022.05.26.493539
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