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The Arabidopsis ATP-Binding Cassette E protein ABCE2 is a conserved component of the translation machinery

View ORCID ProfileCarla Navarro-Quiles, View ORCID ProfileEduardo Mateo-Bonmatí, View ORCID ProfileHéctor Candela, View ORCID ProfilePedro Robles, View ORCID ProfileAntonio Martínez-Laborda, View ORCID ProfileYolanda Fernández, View ORCID ProfileJan Šimura, View ORCID ProfileKarin Ljung, View ORCID ProfileVicente Rubio, View ORCID ProfileMaría Rosa Ponce, View ORCID ProfileJosé Luis Micol
doi: https://doi.org/10.1101/2022.05.30.493987
Carla Navarro-Quiles
1Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, Elche 03202, Spain
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Eduardo Mateo-Bonmatí
1Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, Elche 03202, Spain
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Héctor Candela
1Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, Elche 03202, Spain
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Pedro Robles
1Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, Elche 03202, Spain
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Antonio Martínez-Laborda
1Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, Elche 03202, Spain
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Yolanda Fernández
2Centro Nacional de Biotecnología, CNB-CSIC, Madrid 28049, Spain
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Jan Šimura
3Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden
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Karin Ljung
3Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden
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Vicente Rubio
2Centro Nacional de Biotecnología, CNB-CSIC, Madrid 28049, Spain
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María Rosa Ponce
1Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, Elche 03202, Spain
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José Luis Micol
1Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, Elche 03202, Spain
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  • For correspondence: jlmicol@umh.es
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SUMMARY

  • ATP-Binding Cassette E (ABCE) proteins dissociate cytoplasmic ribosomes after translation terminates, and contribute to ribosome recycling, thus linking translation termination to initiation. This function has been demonstrated to be essential in animals, fungi, and archaea, but remains unexplored in plants.

  • In most species, ABCE is encoded by a single-copy gene; by contrast, Arabidopsis thaliana has two ABCE paralogs, of which ABCE2 seems to conserve the ancestral function. We isolated apiculata7-1 (api7-1), a viable, hypomorphic allele of ABCE2,which has a pleiotropic morphological phenotype reminiscent of mutations affecting ribosome biogenesis factors and ribosomal proteins. We also studied api7-2, a null, recessive lethal allele of ABCE2.

  • Co-immunoprecipitation experiments showed that ABCE2 physically interacts with components of the translation machinery. An RNA-seq study of the api7-1 mutant showed increased responses to iron and sulfur starvation. We also found increased transcript levels of genes related to auxin signaling and metabolism.

  • Our results support a conserved role for ABCE proteins in ribosome recycling in plants, as previously shown for the animal, fungal, and archaeal lineages. In plants, the ABCE2 protein seems important for general growth and vascular development, likely due to an indirect effect through auxin metabolism.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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The Arabidopsis ATP-Binding Cassette E protein ABCE2 is a conserved component of the translation machinery
Carla Navarro-Quiles, Eduardo Mateo-Bonmatí, Héctor Candela, Pedro Robles, Antonio Martínez-Laborda, Yolanda Fernández, Jan Šimura, Karin Ljung, Vicente Rubio, María Rosa Ponce, José Luis Micol
bioRxiv 2022.05.30.493987; doi: https://doi.org/10.1101/2022.05.30.493987
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The Arabidopsis ATP-Binding Cassette E protein ABCE2 is a conserved component of the translation machinery
Carla Navarro-Quiles, Eduardo Mateo-Bonmatí, Héctor Candela, Pedro Robles, Antonio Martínez-Laborda, Yolanda Fernández, Jan Šimura, Karin Ljung, Vicente Rubio, María Rosa Ponce, José Luis Micol
bioRxiv 2022.05.30.493987; doi: https://doi.org/10.1101/2022.05.30.493987

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