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GeneToList: A web application to assist with gene identifiers for the non-bioinformatics-savvy scientist

View ORCID ProfileJoshua D. Breidenbach, E. Francis Begue III, David J. Kennedy, Steven T. Haller
doi: https://doi.org/10.1101/2022.06.09.494882
Joshua D. Breidenbach
1University of Toledo College of Medicine and Life Sciences, Toledo, Ohio
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  • For correspondence: joshua.breidenbach@rockets.utoledo.edu
E. Francis Begue III
1University of Toledo College of Medicine and Life Sciences, Toledo, Ohio
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David J. Kennedy
1University of Toledo College of Medicine and Life Sciences, Toledo, Ohio
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Steven T. Haller
1University of Toledo College of Medicine and Life Sciences, Toledo, Ohio
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Abstract

The increasing incorporation of omics technology into clinical and translational medicine presents challenges to end users of the large and complex datasets that are generated by these methods. A particular challenge in genomics is that the nomenclature for genes is not uniform between large genomic databases or between commonly used genetic analysis tools. Furthermore, outdated genomic nomenclature can still be found amongst scientific communications including peer-reviewed manuscripts. Therefore, a web application (GeneToList) was developed to assist is gene ID conversion and alias matching, with a specific focus on achieving a user-friendly interface for the non-bioinformatics-savvy scientist.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted June 12, 2022.
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GeneToList: A web application to assist with gene identifiers for the non-bioinformatics-savvy scientist
Joshua D. Breidenbach, E. Francis Begue III, David J. Kennedy, Steven T. Haller
bioRxiv 2022.06.09.494882; doi: https://doi.org/10.1101/2022.06.09.494882
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GeneToList: A web application to assist with gene identifiers for the non-bioinformatics-savvy scientist
Joshua D. Breidenbach, E. Francis Begue III, David J. Kennedy, Steven T. Haller
bioRxiv 2022.06.09.494882; doi: https://doi.org/10.1101/2022.06.09.494882

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