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The cohesin subunit RAD21.2 functions as a recombination silencer of ribosomal DNA arrays

Viola Kuttig, Jason Sims, Yuki Hamamura, Shinichiro Komaki, Maren Köhler, Sara Christina Stolze, Joke De Jaeger-Braet, Hasibe Tuncay Elbasy, Hirofumi Nakagami, Antonio Virgilio Failla, View ORCID ProfilePeter Schlögelhofer, View ORCID ProfileArp Schnittger
doi: https://doi.org/10.1101/2022.06.20.496767
Viola Kuttig
1University of Hamburg, Department of Developmental Biology, Ohnhorststr. 18, D-22609 Hamburg, Germany
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Jason Sims
1University of Hamburg, Department of Developmental Biology, Ohnhorststr. 18, D-22609 Hamburg, Germany
2Department of Chromosome Biology, Max Perutz Labs, Vienna Biocenter, University of Vienna, Vienna, Austria
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Yuki Hamamura
1University of Hamburg, Department of Developmental Biology, Ohnhorststr. 18, D-22609 Hamburg, Germany
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Shinichiro Komaki
3Nara Institute of Science and Technology, Graduate School of Biological Sciences, 8916-5 Takayama, Ikoma, Nara 630-0192, Japan
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Maren Köhler
1University of Hamburg, Department of Developmental Biology, Ohnhorststr. 18, D-22609 Hamburg, Germany
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Sara Christina Stolze
4Max-Planck-Institute for Plant Breeding Research, 50829 Cologne, Germany
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Joke De Jaeger-Braet
1University of Hamburg, Department of Developmental Biology, Ohnhorststr. 18, D-22609 Hamburg, Germany
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Hasibe Tuncay Elbasy
1University of Hamburg, Department of Developmental Biology, Ohnhorststr. 18, D-22609 Hamburg, Germany
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Hirofumi Nakagami
4Max-Planck-Institute for Plant Breeding Research, 50829 Cologne, Germany
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Antonio Virgilio Failla
5Light microscopy facility, University medical center Hamburg Eppendorf, Martini Straße 52, 22046 Hamburg
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Peter Schlögelhofer
2Department of Chromosome Biology, Max Perutz Labs, Vienna Biocenter, University of Vienna, Vienna, Austria
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  • ORCID record for Peter Schlögelhofer
Arp Schnittger
1University of Hamburg, Department of Developmental Biology, Ohnhorststr. 18, D-22609 Hamburg, Germany
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  • For correspondence: [email protected]
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Introductory Paragraph

In many species, including Arabidopsis, heterochromatin often comprises repetitive DNA elements, such as arrays of ribosomal DNA (rDNA). Repetitive regions pose a risk in meiosis since recombination between them can lead to gross genomic rearrangements. However, meiotic recombination at rDNA arrays and other heterochromatic repeat regions is blocked by not well understood mechanisms. Here, we have identified RAD21.2, an α-kleisin subunit of cohesin, as a repressor of meiotic recombination at the rDNA regions in Arabidopsis. We show that RAD21.2 co-localizes with heterochromatic factors and is specifically enriched at rDNA repeats, which are devoid of the meiosis specific α-kleisin REC8, needed for recombination. Knocking down RAD21.2, we find that REC8 moves into the nucleolus organizing regions (NORs), where we see an increase of RAD51 recombinase foci numbers. Concomitantly, we find extensive rearrangements of the NORs and the offspring of these plants have large variation in rDNA copy numbers demonstrating that RAD21.2 is necessary for transgenerational genome stability.

One-Sentence Summary The cohesin component RAD21.2 represses meiotic recombination and by that contributes to genome stability over generations.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted June 20, 2022.
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The cohesin subunit RAD21.2 functions as a recombination silencer of ribosomal DNA arrays
Viola Kuttig, Jason Sims, Yuki Hamamura, Shinichiro Komaki, Maren Köhler, Sara Christina Stolze, Joke De Jaeger-Braet, Hasibe Tuncay Elbasy, Hirofumi Nakagami, Antonio Virgilio Failla, Peter Schlögelhofer, Arp Schnittger
bioRxiv 2022.06.20.496767; doi: https://doi.org/10.1101/2022.06.20.496767
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The cohesin subunit RAD21.2 functions as a recombination silencer of ribosomal DNA arrays
Viola Kuttig, Jason Sims, Yuki Hamamura, Shinichiro Komaki, Maren Köhler, Sara Christina Stolze, Joke De Jaeger-Braet, Hasibe Tuncay Elbasy, Hirofumi Nakagami, Antonio Virgilio Failla, Peter Schlögelhofer, Arp Schnittger
bioRxiv 2022.06.20.496767; doi: https://doi.org/10.1101/2022.06.20.496767

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