Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Adaptive duplication and functional diversification of Protein kinase R contribute to the uniqueness of bat-virus interactions

View ORCID ProfileStéphanie Jacquet, Michelle Culbertson, Chi Zang, Adil El Filali, Clément De La Myre Mory, Jean-Baptiste Pons, Ondine Filippi-Codaccioni, M. Elise Lauterbur, Barthélémy Ngoubangoye, Jeanne Duhayer, Clément Verez, Chorong Park, Clara Dahoui, Clayton M. Carey, Greg Brennan, David Enard, Andrea Cimarelli, Stefan Rothenburg, View ORCID ProfileNels C. Elde, Dominique Pontier, View ORCID ProfileLucie Etienne
doi: https://doi.org/10.1101/2022.06.28.497829
Stéphanie Jacquet
1Laboratoire de Biométrie et Biologie Evolutive (LBBE), UMR 5558, UCBL1, CNRS, Lyon
2CIRI, Centre International de Recherche en Infectiologie, Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, ENS de Lyon, F-69007, Lyon, France
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Stéphanie Jacquet
Michelle Culbertson
3Department of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Chi Zang
4Department of Medical Microbiology and Immunology, School of Medicine, University of California Davis , Davis, CA 95616, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Adil El Filali
1Laboratoire de Biométrie et Biologie Evolutive (LBBE), UMR 5558, UCBL1, CNRS, Lyon
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Clément De La Myre Mory
2CIRI, Centre International de Recherche en Infectiologie, Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, ENS de Lyon, F-69007, Lyon, France
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Jean-Baptiste Pons
1Laboratoire de Biométrie et Biologie Evolutive (LBBE), UMR 5558, UCBL1, CNRS, Lyon
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Ondine Filippi-Codaccioni
1Laboratoire de Biométrie et Biologie Evolutive (LBBE), UMR 5558, UCBL1, CNRS, Lyon
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
M. Elise Lauterbur
5Department of Ecology and Evolutionary Biology, University of Arizona, Tucson AZ 85721
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Barthélémy Ngoubangoye
6International Center of Medical Research of Franceville, Primatology Centre, Franceville, Gabon
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Jeanne Duhayer
1Laboratoire de Biométrie et Biologie Evolutive (LBBE), UMR 5558, UCBL1, CNRS, Lyon
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Clément Verez
2CIRI, Centre International de Recherche en Infectiologie, Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, ENS de Lyon, F-69007, Lyon, France
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Chorong Park
4Department of Medical Microbiology and Immunology, School of Medicine, University of California Davis , Davis, CA 95616, USA
7Department of Microbiology-Immunology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Clara Dahoui
2CIRI, Centre International de Recherche en Infectiologie, Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, ENS de Lyon, F-69007, Lyon, France
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Clayton M. Carey
3Department of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA
8School of Biological Sciences, University of Utah, Salt Lake City, UT, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Greg Brennan
4Department of Medical Microbiology and Immunology, School of Medicine, University of California Davis , Davis, CA 95616, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
David Enard
5Department of Ecology and Evolutionary Biology, University of Arizona, Tucson AZ 85721
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Andrea Cimarelli
2CIRI, Centre International de Recherche en Infectiologie, Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, ENS de Lyon, F-69007, Lyon, France
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Stefan Rothenburg
4Department of Medical Microbiology and Immunology, School of Medicine, University of California Davis , Davis, CA 95616, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Nels C. Elde
3Department of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA
9Howard Hughes Medical Institute, 4000 Jones Bridge Road, Chevy Chase, MD, 20815, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Nels C. Elde
Dominique Pontier
1Laboratoire de Biométrie et Biologie Evolutive (LBBE), UMR 5558, UCBL1, CNRS, Lyon
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: stephanie.jacquet@ens-lyon.fr dominique.pontier@univ-lyon1.fr lucie.etienne@ens-lyon.fr
Lucie Etienne
2CIRI, Centre International de Recherche en Infectiologie, Univ Lyon, Inserm, U1111, Université Claude Bernard Lyon 1, CNRS, UMR5308, ENS de Lyon, F-69007, Lyon, France
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Lucie Etienne
  • For correspondence: stephanie.jacquet@ens-lyon.fr dominique.pontier@univ-lyon1.fr lucie.etienne@ens-lyon.fr
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Preview PDF
Loading

Abstract

Several bat species act as asymptomatic reservoirs for many viruses that are instead highly pathogenic in other mammals. Here, we have characterized the functional diversification of the Protein kinase R (PKR), a major antiviral innate defense system. Our data indicate that PKR has evolved under positive selection and has undergone repeated genomic duplications in bats, in contrast to all studied mammals that possess a single copy of the gene. Functional testing of the relationship between PKR and poxvirus antagonists revealed how an evolutionary conflict with ancient pathogenic poxviruses has shaped a specific bat host-virus interface. More importantly, we determined that duplicated PKRs of the Myotis species have undergone functional diversification allowing them to collectively escape from and enhance control of DNA and RNA viruses. These findings suggest that viral-driven adaptations in PKR contribute to modern virus-bat interactions and may account for bat specific immunity.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted June 30, 2022.
Download PDF
Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Adaptive duplication and functional diversification of Protein kinase R contribute to the uniqueness of bat-virus interactions
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Adaptive duplication and functional diversification of Protein kinase R contribute to the uniqueness of bat-virus interactions
Stéphanie Jacquet, Michelle Culbertson, Chi Zang, Adil El Filali, Clément De La Myre Mory, Jean-Baptiste Pons, Ondine Filippi-Codaccioni, M. Elise Lauterbur, Barthélémy Ngoubangoye, Jeanne Duhayer, Clément Verez, Chorong Park, Clara Dahoui, Clayton M. Carey, Greg Brennan, David Enard, Andrea Cimarelli, Stefan Rothenburg, Nels C. Elde, Dominique Pontier, Lucie Etienne
bioRxiv 2022.06.28.497829; doi: https://doi.org/10.1101/2022.06.28.497829
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Adaptive duplication and functional diversification of Protein kinase R contribute to the uniqueness of bat-virus interactions
Stéphanie Jacquet, Michelle Culbertson, Chi Zang, Adil El Filali, Clément De La Myre Mory, Jean-Baptiste Pons, Ondine Filippi-Codaccioni, M. Elise Lauterbur, Barthélémy Ngoubangoye, Jeanne Duhayer, Clément Verez, Chorong Park, Clara Dahoui, Clayton M. Carey, Greg Brennan, David Enard, Andrea Cimarelli, Stefan Rothenburg, Nels C. Elde, Dominique Pontier, Lucie Etienne
bioRxiv 2022.06.28.497829; doi: https://doi.org/10.1101/2022.06.28.497829

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Evolutionary Biology
Subject Areas
All Articles
  • Animal Behavior and Cognition (4855)
  • Biochemistry (10798)
  • Bioengineering (8045)
  • Bioinformatics (27310)
  • Biophysics (13987)
  • Cancer Biology (11127)
  • Cell Biology (16062)
  • Clinical Trials (138)
  • Developmental Biology (8788)
  • Ecology (13294)
  • Epidemiology (2067)
  • Evolutionary Biology (17364)
  • Genetics (11689)
  • Genomics (15925)
  • Immunology (11034)
  • Microbiology (26093)
  • Molecular Biology (10654)
  • Neuroscience (56568)
  • Paleontology (418)
  • Pathology (1732)
  • Pharmacology and Toxicology (3005)
  • Physiology (4547)
  • Plant Biology (9630)
  • Scientific Communication and Education (1615)
  • Synthetic Biology (2689)
  • Systems Biology (6979)
  • Zoology (1510)