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The CDK7 inhibitor CT7001 (Samuraciclib) targets proliferation pathways to inhibit advanced prostate cancer

View ORCID ProfileTheodora A. Constantin, Anabel Varela-Carver, Kyle K. Greenland, Gilberto Serrano de Almeida, Lucy Penfold, Simon Ang, Alice Ormrod, Edward K. Ainscow, Ash K. Bahl, David Carling, View ORCID ProfileMatthew J. Fuchter, View ORCID ProfileSimak Ali, View ORCID ProfileCharlotte L. Bevan
doi: https://doi.org/10.1101/2022.06.29.497030
Theodora A. Constantin
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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  • ORCID record for Theodora A. Constantin
Anabel Varela-Carver
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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Kyle K. Greenland
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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Gilberto Serrano de Almeida
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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Lucy Penfold
2MRC London Institute of Medical Sciences, Imperial College London, Hammersmith Hospital, London, United Kingdom
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Simon Ang
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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Alice Ormrod
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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Edward K. Ainscow
3Carrick Therapeutics, Nova UCD, Bellfield Innovation Park, Dublin 4, Ireland
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Ash K. Bahl
3Carrick Therapeutics, Nova UCD, Bellfield Innovation Park, Dublin 4, Ireland
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David Carling
2MRC London Institute of Medical Sciences, Imperial College London, Hammersmith Hospital, London, United Kingdom
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Matthew J. Fuchter
4Department of Chemistry and Molecular Sciences Research Hub, Imperial College London, White City Campus, London, United Kingdom
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  • ORCID record for Matthew J. Fuchter
Simak Ali
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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Charlotte L. Bevan
1Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, Hammersmith Hospital Campus, London, United Kingdom
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  • ORCID record for Charlotte L. Bevan
  • For correspondence: charlotte.bevan@imperial.ac.uk
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ABSTRACT

Background Current strategies to inhibit the androgen receptor (AR) are circumvented in castration-resistant prostate cancer (CRPC). Cyclin-dependent kinase 7 (CDK7) promotes AR signalling, in addition to established roles in cell cycle and global transcription regulation, together, providing a rationale for its therapeutic targeting in CRPC.

Methods The antitumour activity of CT7001, an orally bioavailable CDK7 inhibitor, was investigated across CRPC models in vitro and in xenograft models in vivo. Cell-based assays and transcriptomic analyses of treated xenografts were employed to investigate the mechanism driving activity of CT7001, alone and in combination with the antiandrogen enzalutamide.

Results CT7001 selectively engages with CDK7 in prostate cancer cells, causing inhibition of proliferation and cell cycle arrest. Activation of p53, induction of apoptosis, and suppression of transcription mediated by full-length and constitutively active AR splice variants contribute to antitumour efficacy in vitro. Oral administration of CT7001 represses growth of CRPC xenografts and significantly augments growth inhibition achieved by enzalutamide. Transcriptome analyses of treated xenografts indicate cell cycle and AR inhibition as the mode of action of CT7001 in vivo.

Conclusions This study supports CDK7 inhibition as a strategy to target deregulated cell proliferation and demonstrates CT7001 is a promising CRPC therapeutic, alone or in combination with AR-targeting compounds.

Competing Interest Statement

G.S.A. has previously been supported by a research grant from Carrick Therapeutics Ltd to C.L.B. S. Ali is a named inventor on CDK7 inhibitor patents that have been licensed to Carrick Therapeutics Ltd, has received royalty payments, shares, and research funding from Carrick Therapeutics. M.J.F. is a named inventor on CDK7 inhibitor patents that have been licensed to Carrick Therapeutics Ltd and has received royalty payments from Carrick Therapeutics. A.K.B. and E.C. are/were at the time of this study employees of Carrick Therapeutics. The following authors declare that they have no competing interests: T.A.C., A.V.C., K.K.G., L.P., S. Ang, A.O., D.C..

  • LIST OF ABBREVIATIONS

    AR
    androgen receptor
    AR-V
    androgen receptor variant
    AST
    aspartate aminotransferase
    CAK
    CDK-activating kinase
    CDK
    cyclin-dependent kinase
    CeTSA
    cellular thermal shift assay
    CRPC
    castration-resistant prostate cancer
    CTD
    C-terminal domain
    DMSO
    dimethylsulfoxide
    FCS
    foetal calf serum
    FDR
    false discovery rate
    FL-AR
    full-length androgen receptor
    GR
    growth-rate
    GSEA
    gene set enrichment analysis
    LBD
    ligand-binding domain
    Padj
    adjusted p-value
    PBS
    phosphate buffered saline
    PCA
    principal component analysis
    PolII
    RNA polymerase II
    PSA
    prostate-specific antigen
    P-TEFb
    positive transcription elongation factor b
    Rb
    retinoblastoma
    RT-qPCR
    quantitative reverse transcription PCR
    SRB
    sulforhodamine B
  • Copyright 
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    Posted June 29, 2022.
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    The CDK7 inhibitor CT7001 (Samuraciclib) targets proliferation pathways to inhibit advanced prostate cancer
    Theodora A. Constantin, Anabel Varela-Carver, Kyle K. Greenland, Gilberto Serrano de Almeida, Lucy Penfold, Simon Ang, Alice Ormrod, Edward K. Ainscow, Ash K. Bahl, David Carling, Matthew J. Fuchter, Simak Ali, Charlotte L. Bevan
    bioRxiv 2022.06.29.497030; doi: https://doi.org/10.1101/2022.06.29.497030
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    The CDK7 inhibitor CT7001 (Samuraciclib) targets proliferation pathways to inhibit advanced prostate cancer
    Theodora A. Constantin, Anabel Varela-Carver, Kyle K. Greenland, Gilberto Serrano de Almeida, Lucy Penfold, Simon Ang, Alice Ormrod, Edward K. Ainscow, Ash K. Bahl, David Carling, Matthew J. Fuchter, Simak Ali, Charlotte L. Bevan
    bioRxiv 2022.06.29.497030; doi: https://doi.org/10.1101/2022.06.29.497030

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