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Electron-counting MicroED data with the K2 and K3 direct electron detectors

Max T.B. Clabbers, Michael W. Martynowycz, Johan Hattne, Brent L. Nannenga, Tamir Gonen
doi: https://doi.org/10.1101/2022.07.04.498775
Max T.B. Clabbers
1Department of Biological Chemistry, University of California, Los Angeles CA 90095
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Michael W. Martynowycz
1Department of Biological Chemistry, University of California, Los Angeles CA 90095
2Howard Hughes Medical Institute, University of California, Los Angeles CA 90095
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Johan Hattne
1Department of Biological Chemistry, University of California, Los Angeles CA 90095
2Howard Hughes Medical Institute, University of California, Los Angeles CA 90095
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Brent L. Nannenga
3Chemical Engineering, School for Engineering of Matter, Arizona State University, Tempe, AZ
4Center for Applied Structural Discovery, Biodesign Institute, Arizona State University, Tempe, AZ
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Tamir Gonen
1Department of Biological Chemistry, University of California, Los Angeles CA 90095
2Howard Hughes Medical Institute, University of California, Los Angeles CA 90095
5Department of Physiology, University of California, Los Angeles CA 90095
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  • For correspondence: tgonen@g.ucla.edu
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Abstract

Microcrystal electron diffraction (MicroED) uses electron cryo-microscopy (cryo-EM) to collect diffraction data from small crystals during continuous rotation of the sample. As a result of advances in hardware as well as methods development, the data quality has continuously improved over the past decade, to the point where even macromolecular structures can be determined ab initio. Detectors suitable for electron diffraction should ideally have fast readout to record data in movie mode, and high sensitivity at low exposure rates to accurately report the intensities. Direct electron detectors are commonly used in cryo-EM imaging for their sensitivity and speed, but despite their availability are generally not used in diffraction. Primary concerns with diffraction experiments are the dynamic range and coincidence loss, which will corrupt the measurement if the flux exceeds the count rate of the detector. Here, we describe instrument setup and low-exposure MicroED data collection in electron-counting mode using K2 and K3 direct electron detectors and show that the integrated intensities can be effectively used to solve structures of two macromolecules between 1.2 Å and 2.8 Å. Even though a beam stop was not used in these studies we did not observe damage to the camera. As these cameras are already available in many cryo-EM facilities, this provides opportunities for users who do not have access to dedicated facilities for MicroED.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted July 05, 2022.
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Electron-counting MicroED data with the K2 and K3 direct electron detectors
Max T.B. Clabbers, Michael W. Martynowycz, Johan Hattne, Brent L. Nannenga, Tamir Gonen
bioRxiv 2022.07.04.498775; doi: https://doi.org/10.1101/2022.07.04.498775
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Electron-counting MicroED data with the K2 and K3 direct electron detectors
Max T.B. Clabbers, Michael W. Martynowycz, Johan Hattne, Brent L. Nannenga, Tamir Gonen
bioRxiv 2022.07.04.498775; doi: https://doi.org/10.1101/2022.07.04.498775

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