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TMEM164 is an acyltransferase that forms ferroptotic polyunsaturated ether phospholipids

Alex Reed, Timothy Ware, Haoxin Li, J. Fernando Bazan, Benjamin F. Cravatt
doi: https://doi.org/10.1101/2022.07.06.498872
Alex Reed
1Department of Chemistry, The Scripps Research Institute, San Diego, CA 92037
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Timothy Ware
1Department of Chemistry, The Scripps Research Institute, San Diego, CA 92037
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Haoxin Li
1Department of Chemistry, The Scripps Research Institute, San Diego, CA 92037
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J. Fernando Bazan
2ℏ bioconsulting, llc, Stillwater, MN 55082, and %Unit for Structural Biology, VIB-UGent Center for Inflammation Research, Technologiepark 71, 9052 Ghent, Belgium
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  • For correspondence: cravatt@scripps.edu jfbazan@gmail.com
Benjamin F. Cravatt
1Department of Chemistry, The Scripps Research Institute, San Diego, CA 92037
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  • For correspondence: cravatt@scripps.edu jfbazan@gmail.com
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Abstract

Ferroptosis is an iron-dependent form of cell death driven by the oxidation of polyunsaturated (PUFA) phospholipids. Large-scale genetic screens have pointed to a specialized role for PUFA ether phospholipids (ePLs) in promoting ferroptosis. Our understanding of the enzymes involved in PUFA ePL production, however, remains incomplete. Here we show using a combination of pathway mining of genetic dependency maps, AlphaFold-guided structure predictions, and targeted lipidomics that the uncharacterized transmembrane protein TMEM164 – genetic ablation of which has been shown to protect cells from ferroptosis – is a cysteine active-center enzyme that selectively transfers C20:4 acyl chains from phosphatidylcholine to lyso-ePLs to furnish PUFA-ePLs. TMEM164-null cells show substantial reductions in PUFA-ePLs, but not PUFA ester phospholipids, supporting that the selective suppression of PUFA-ePLs is sufficient to protect cells from ferroptosis and designating TMEM164 as a key enzyme specifically responsible for regulating this class of lipids.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted July 06, 2022.
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TMEM164 is an acyltransferase that forms ferroptotic polyunsaturated ether phospholipids
Alex Reed, Timothy Ware, Haoxin Li, J. Fernando Bazan, Benjamin F. Cravatt
bioRxiv 2022.07.06.498872; doi: https://doi.org/10.1101/2022.07.06.498872
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TMEM164 is an acyltransferase that forms ferroptotic polyunsaturated ether phospholipids
Alex Reed, Timothy Ware, Haoxin Li, J. Fernando Bazan, Benjamin F. Cravatt
bioRxiv 2022.07.06.498872; doi: https://doi.org/10.1101/2022.07.06.498872

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