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Gene-by-gene screen of the unknown proteins encoded on P. falciparum chromosome 3

View ORCID ProfileJessica Kimmel, View ORCID ProfileMarius Schmitt, View ORCID ProfileAlexej Sinner, Pascal Jansen, View ORCID ProfileSheila Mainye, View ORCID ProfileGala Ramón-Zamorano, View ORCID ProfileChrista Geeke Toenhake, View ORCID ProfileJan Stephan Wichers, View ORCID ProfileJakob Cronshagen, View ORCID ProfileRicarda Sabitzki, View ORCID ProfilePaolo Mesén-Ramírez, View ORCID ProfileHannah Michaela Behrens, View ORCID ProfileRichárd Bártfai, View ORCID ProfileTobias Spielmann
doi: https://doi.org/10.1101/2022.07.07.499005
Jessica Kimmel
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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  • ORCID record for Jessica Kimmel
Marius Schmitt
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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Alexej Sinner
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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Pascal Jansen
2Department of Molecular Biology, Radboud University, Nijmegen 6525 GA, the Netherlands
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Sheila Mainye
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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  • ORCID record for Sheila Mainye
Gala Ramón-Zamorano
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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Christa Geeke Toenhake
2Department of Molecular Biology, Radboud University, Nijmegen 6525 GA, the Netherlands
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  • ORCID record for Christa Geeke Toenhake
Jan Stephan Wichers
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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  • ORCID record for Jan Stephan Wichers
Jakob Cronshagen
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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Ricarda Sabitzki
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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  • ORCID record for Ricarda Sabitzki
Paolo Mesén-Ramírez
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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Hannah Michaela Behrens
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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  • ORCID record for Hannah Michaela Behrens
Richárd Bártfai
2Department of Molecular Biology, Radboud University, Nijmegen 6525 GA, the Netherlands
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Tobias Spielmann
1Bernhard Nocht Institute for Tropical Medicine, Bernhard Nocht Str. 74, 20359 Hamburg, Germany
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  • For correspondence: spielmann@bnitm.de
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ABSTRACT

Taxa-specific proteins are key determinants defining the biology of all organisms and represent prime drug targets in pathogens. However, lacking comparability with proteins in other lineages makes them particularly difficult to study. In malaria parasites this is exacerbated by technical limitations. Here, we analysed the cellular location, essentiality, function and, in selected cases, interactome of all unknown non-secretory proteins encoded on an entire P. falciparum chromosome. The nucleus was the most common localisation, indicating it is a hotspot of parasite-specific biology. More in-depth functional studies with four proteins revealed essential roles in DNA replication and mitosis. The novel mitosis proteins defined a possible orphan complex and a highly diverged complex needed for the spindle-kinetochore connection. Structure-function comparisons indicated that the taxa-specific proteins evolved by different mechanisms. This work demonstrates the feasibility of gene-by-gene screens to elucidate the biology of malaria parasites and reveal critical parasite-specific processes of interest as drug targets.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted July 08, 2022.
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Gene-by-gene screen of the unknown proteins encoded on P. falciparum chromosome 3
Jessica Kimmel, Marius Schmitt, Alexej Sinner, Pascal Jansen, Sheila Mainye, Gala Ramón-Zamorano, Christa Geeke Toenhake, Jan Stephan Wichers, Jakob Cronshagen, Ricarda Sabitzki, Paolo Mesén-Ramírez, Hannah Michaela Behrens, Richárd Bártfai, Tobias Spielmann
bioRxiv 2022.07.07.499005; doi: https://doi.org/10.1101/2022.07.07.499005
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Gene-by-gene screen of the unknown proteins encoded on P. falciparum chromosome 3
Jessica Kimmel, Marius Schmitt, Alexej Sinner, Pascal Jansen, Sheila Mainye, Gala Ramón-Zamorano, Christa Geeke Toenhake, Jan Stephan Wichers, Jakob Cronshagen, Ricarda Sabitzki, Paolo Mesén-Ramírez, Hannah Michaela Behrens, Richárd Bártfai, Tobias Spielmann
bioRxiv 2022.07.07.499005; doi: https://doi.org/10.1101/2022.07.07.499005

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