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How to deal with toxic amino acids: the bipartite AzlCD complex exports histidine in Bacillus subtilis

Janek Meißner, Thorben Schramm, Ben Hoßbach, Katharina Stark, Hannes Link, View ORCID ProfileJörg Stülke
doi: https://doi.org/10.1101/2022.07.07.499250
Janek Meißner
aDepartment of General Microbiology, Institute for Microbiology & Genetics, GZMB, Georg-August-University Göttingen, 37077 Göttingen, Germany
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Thorben Schramm
bInterfaculty Institute for Microbiology and Infection Medicine Tübingen, University of Tübingen, 72076 Tübingen, Germany
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Ben Hoßbach
aDepartment of General Microbiology, Institute for Microbiology & Genetics, GZMB, Georg-August-University Göttingen, 37077 Göttingen, Germany
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Katharina Stark
aDepartment of General Microbiology, Institute for Microbiology & Genetics, GZMB, Georg-August-University Göttingen, 37077 Göttingen, Germany
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Hannes Link
bInterfaculty Institute for Microbiology and Infection Medicine Tübingen, University of Tübingen, 72076 Tübingen, Germany
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Jörg Stülke
aDepartment of General Microbiology, Institute for Microbiology & Genetics, GZMB, Georg-August-University Göttingen, 37077 Göttingen, Germany
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  • ORCID record for Jörg Stülke
  • For correspondence: jstuelk@gwdg.de
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ABSTRACT

In the Gram-positive model bacterium Bacillus subtilis, the presence of the amino acid glutamate triggers potassium uptake due to the glutamate-mediated activation of the potassium channel KtrCD. As a result, the intracellular accumulation of glutamate is toxic in strains lacking the second messenger cyclic di-AMP since these cells are unable to limit potassium uptake. We observed that the presence of histidine, which is degraded to glutamate, is also toxic for a B. subtilis strain that lacks all three c-di-AMP synthesizing enzymes. However, suppressor mutants emerged, and whole genome sequencing revealed mutations in the azlB gene encoding the repressor of the azl operon. This operon encodes an exporter and an importer for branched-chain amino acids. The suppressor mutations result in overexpression of the azl operon. Deletion of the azlCD genes encoding the branched-chain amino acid exporter restored the toxicity of histidine indicating that this exporter is required for histidine export and resistance to otherwise toxic levels of the amino acid. The higher abundance of the amino acid exporter AzlCD increased the extracellular concentration of histidine, thus confirming the new function of AzlCD as a histidine exporter. Unexpectedly, AzlB-mediated repression of the operon remains active even in the presence of amino acids suggesting that expression of the azl operon requires mutational inactivation of AzlB.

IMPORTANCE Amino acids are building blocks for protein biosynthesis in each living cell. However, due to their reactivity as well as the similarity between several amino amino acids, they may also be involved in harmful reactions or in non-cognate interactions and thus be toxic. Bacillus subtilis can deal with otherwise toxic histidine by overexpressing a bipartite amino acid exporter AzlCD. Although encoded in an operon that also contains a gene for an amino acid importer, the corresponding genes are not expressed, irrespective of the availability or not of amino acids in the medium. This suggests that the azl operon is a last resort to deal with histidine stress that can be expressed due to mutational inactivation of the cognate repressor, AzlB.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • The text has been revised, additional data concerning a hutH mutant have been added.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted September 20, 2022.
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How to deal with toxic amino acids: the bipartite AzlCD complex exports histidine in Bacillus subtilis
Janek Meißner, Thorben Schramm, Ben Hoßbach, Katharina Stark, Hannes Link, Jörg Stülke
bioRxiv 2022.07.07.499250; doi: https://doi.org/10.1101/2022.07.07.499250
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How to deal with toxic amino acids: the bipartite AzlCD complex exports histidine in Bacillus subtilis
Janek Meißner, Thorben Schramm, Ben Hoßbach, Katharina Stark, Hannes Link, Jörg Stülke
bioRxiv 2022.07.07.499250; doi: https://doi.org/10.1101/2022.07.07.499250

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