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Multivariate chemogenomic screening prioritizes new macrofilaricidal leads

View ORCID ProfileNicolas J. Wheeler, View ORCID ProfileKaetlyn T. Ryan, View ORCID ProfileKendra J. Gallo, Clair R. Henthorn, View ORCID ProfileSpencer S. Ericksen, View ORCID ProfileJohn D. Chan, View ORCID ProfileMostafa Zamanian
doi: https://doi.org/10.1101/2022.07.25.501423
Nicolas J. Wheeler
1Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI USA
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Kaetlyn T. Ryan
1Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI USA
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Kendra J. Gallo
1Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI USA
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Clair R. Henthorn
1Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI USA
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Spencer S. Ericksen
2Small Molecule Screening Facility, Drug Development Core, UW-Carbone Cancer Center, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI USA
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John D. Chan
1Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI USA
3Department of Chemistry, University of Wisconsin-Oshkosh, Oshkosh, WI USA
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Mostafa Zamanian
1Department of Pathobiological Sciences, University of Wisconsin-Madison, Madison, WI USA
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  • ORCID record for Mostafa Zamanian
  • For correspondence: mzamanian@wisc.edu
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Abstract

Development of direct acting macrofilaricides for the treatment of human filariases is hampered by limitations in screening throughput imposed by the parasite life cycle. Efforts to circumvent arduous screening of adult filariae include drug repurposing and high-throughput screens that target commensal bacteria. In vitro adult screens typically assess single phenotypes without prior enrichment for chemicals with antifilarial potential. We developed a multivariate screen that identified dozens of compounds with submicromolar macrofilaricidal activity, achieving a hit rate of >50% by leveraging abundantly accessible microfilariae. Adult assays were multiplexed to thoroughly characterize compound activity across relevant parasite fitness traits, including neuromuscular control, fecundity, metabolism, and viability. 17 compounds from a diverse chemogenomic library elicited strong effects on at least one adult trait, with differential potency against microfilariae and adults. Stage-specific drug effects may be crucial to limiting adverse events in endemic regions, and our screen identified five compounds with high potency against adults but low potency or slow-acting microfilaricidal effects, at least one of which acts through a novel mechanism. We show that the use of microfilariae in a primary screen outperforms model nematode developmental assays and virtual screening of protein structures inferred with deep-learning. These data provide new leads for drug development, and the high-content and multiplex assays set a new foundation for antifilarial discovery.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://github.com/zamanianlab/MultivariateScreening-ms

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted July 25, 2022.
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Multivariate chemogenomic screening prioritizes new macrofilaricidal leads
Nicolas J. Wheeler, Kaetlyn T. Ryan, Kendra J. Gallo, Clair R. Henthorn, Spencer S. Ericksen, John D. Chan, Mostafa Zamanian
bioRxiv 2022.07.25.501423; doi: https://doi.org/10.1101/2022.07.25.501423
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Multivariate chemogenomic screening prioritizes new macrofilaricidal leads
Nicolas J. Wheeler, Kaetlyn T. Ryan, Kendra J. Gallo, Clair R. Henthorn, Spencer S. Ericksen, John D. Chan, Mostafa Zamanian
bioRxiv 2022.07.25.501423; doi: https://doi.org/10.1101/2022.07.25.501423

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