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Detection of YAP1 and AR-V7 mRNA for Prostate Cancer prognosis using an ISFET Lab-On-Chip platform

View ORCID ProfileJoseph Broomfield, Melpomeni Kalofonou, Thomas Pataillot-Meakin, Sue M. Powell, Nicolas Moser, View ORCID ProfileCharlotte L. Bevan, View ORCID ProfilePantelis Georgiou
doi: https://doi.org/10.1101/2022.08.04.502773
Joseph Broomfield
†Centre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering, Imperial College London, London, SW7 2AZ, United Kingdom
‡Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, London, W12 0NN, United Kingdom
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Melpomeni Kalofonou
†Centre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering, Imperial College London, London, SW7 2AZ, United Kingdom
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Thomas Pataillot-Meakin
‡Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, London, W12 0NN, United Kingdom
¶Sir Michael Uren Hub, Department of Bioengineering, Imperial College London, London, W12 0BZ, United Kingdom
§Molecular Science Research Hub, Department of Chemistry, Imperial College London, London, W12 0BZ, United Kingdom
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Sue M. Powell
‡Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, London, W12 0NN, United Kingdom
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Nicolas Moser
†Centre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering, Imperial College London, London, SW7 2AZ, United Kingdom
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Charlotte L. Bevan
‡Imperial Centre for Translational and Experimental Medicine, Department of Surgery and Cancer, Imperial College London, London, W12 0NN, United Kingdom
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Pantelis Georgiou
†Centre for Bio-Inspired Technology, Department of Electrical and Electronic Engineering, Imperial College London, London, SW7 2AZ, United Kingdom
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  • ORCID record for Pantelis Georgiou
  • For correspondence: pantelis@imperial.ac.uk
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Abstract

Prostate cancer (PCa) is the second most common cause of male cancer-related death worldwide. The gold standard of treatment for advanced PCa is androgen deprivation therapy (ADT). However, eventual failure of ADT is common and leads to lethal metastatic castration resistant PCa (mCRPC). As such, the detection of relevant biomarkers in the blood for drug resistance in mCRPC patients could lead to personalized treatment options. mRNA detection is often limited by the low specificity of qPCR assays which are restricted to specialised laboratories. Here, we present a novel reversetranscription loop-mediated isothermal amplification (RT-LAMP) assay and have demonstrated its capability for sensitive detection of AR-V7 and YAP1 RNA (3×101 RNA copies per reaction). This work presents a foundation for the detection of circulating mRNA in PCa on a non-invasive Lab-on-chip (LoC) device for use at point-of-care. This technique was implemented onto a Lab-on-Chip platform integrating an array of chemical sensors (ion-sensitive field-effect transistors - ISFETs) for real-time detection of RNA. Detection of RNA presence was achieved through the translation of chemical signals into electrical readouts. Validation of this technique was conducted with rapid detection (<15 min) of extracted RNA from prostate cancer cell lines 22Rv1s and DU145s.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted August 05, 2022.
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Detection of YAP1 and AR-V7 mRNA for Prostate Cancer prognosis using an ISFET Lab-On-Chip platform
Joseph Broomfield, Melpomeni Kalofonou, Thomas Pataillot-Meakin, Sue M. Powell, Nicolas Moser, Charlotte L. Bevan, Pantelis Georgiou
bioRxiv 2022.08.04.502773; doi: https://doi.org/10.1101/2022.08.04.502773
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Detection of YAP1 and AR-V7 mRNA for Prostate Cancer prognosis using an ISFET Lab-On-Chip platform
Joseph Broomfield, Melpomeni Kalofonou, Thomas Pataillot-Meakin, Sue M. Powell, Nicolas Moser, Charlotte L. Bevan, Pantelis Georgiou
bioRxiv 2022.08.04.502773; doi: https://doi.org/10.1101/2022.08.04.502773

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