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Loss of tristetraprolin activates NF-κB induced phenotypic plasticity and primes transition to lethal prostate cancer

View ORCID ProfileKatherine L. Morel, Anis A. Hamid, Beatriz G. Falcón, Jagpreet S. Nanda, Simon Linder, View ORCID ProfileAndries M. Bergman, Henk van der Poel, Ingrid Hofland, Elise M. Bekers, Shana Trostel, Scott Wilkinson, Anson T. Ku, Deborah L. Burkhart, Minhyung Kim, Jina Kim, View ORCID ProfileJasmine T. Plummer, Sungyong You, View ORCID ProfileAdam G. Sowalsky, Wilbert Zwart, Christopher J. Sweeney, View ORCID ProfileLeigh Ellis
doi: https://doi.org/10.1101/2022.08.05.500896
Katherine L. Morel
1South Australian Immunogenomics Cancer Institute, University of Adelaide, Adelaide, SA, Australia
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Anis A. Hamid
2Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, USA
3Department of Surgery, University of Melbourne, Melbourne, Australia
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Beatriz G. Falcón
4Division of Hematology and Oncology, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA
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Jagpreet S. Nanda
4Division of Hematology and Oncology, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA
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Simon Linder
5Division of Oncogenomics, Oncode Institute, The Netherlands Cancer Institute, Amsterdam, the Netherlands
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Andries M. Bergman
5Division of Oncogenomics, Oncode Institute, The Netherlands Cancer Institute, Amsterdam, the Netherlands
6Division of Medical Oncology, The Netherlands Cancer Institute, Amsterdam, The Netherlands
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Henk van der Poel
7Division of Urology, The Netherlands Cancer Institute, Amsterdam, The Netherlands
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Ingrid Hofland
8Core Facility Molecular Pathology and Biobanking, The Netherlands Cancer Institute, Amsterdam, The Netherlands
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Elise M. Bekers
9Division of Pathology, The Netherlands Cancer Institute, Amsterdam, The Netherlands
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Shana Trostel
10Laboratory of Genitourinary Cancer Pathogenesis, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA
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Scott Wilkinson
10Laboratory of Genitourinary Cancer Pathogenesis, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA
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Anson T. Ku
10Laboratory of Genitourinary Cancer Pathogenesis, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA
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Deborah L. Burkhart
2Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, USA
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Minhyung Kim
11Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
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Jina Kim
11Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
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Jasmine T. Plummer
12Department of Developmental Neurobiology, St. Jude Children’s Research Hospital, Memphis, TN, USA
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Sungyong You
11Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
13Division of Urology, Department of Surgery, Cedars-Sinai Medical Center, Los Angeles, CA, USA
15Cedars-Sinai Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA
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Adam G. Sowalsky
10Laboratory of Genitourinary Cancer Pathogenesis, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA
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Wilbert Zwart
5Division of Oncogenomics, Oncode Institute, The Netherlands Cancer Institute, Amsterdam, the Netherlands
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Christopher J. Sweeney
1South Australian Immunogenomics Cancer Institute, University of Adelaide, Adelaide, SA, Australia
2Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, USA
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Leigh Ellis
4Division of Hematology and Oncology, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA
11Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA
14Cedars-Sinai Center for Bioinformatics and Functional Genomics, Los Angeles, CA
15Cedars-Sinai Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA
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  • For correspondence: Leigh.Ellis@csmc.edu Christopher.Sweeney@adelaide.edu.au
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Abstract

Phenotypic plasticity is a hallmark of cancer and increasingly realized as a mechanism of resistance in androgen indifferent prostate tumors. It is critical to identify mechanisms and actionable targets driving phenotypic plasticity. Here, we report that loss of tristetraprolin (TTP, gene ZFP36), an RNA binding protein that regulates mRNA stability increases NF-κB activation and is associated with higher rates of aggressive disease and early recurrence in primary prostate cancer (PCa). We examined the clinical and biological impact of ZFP36 loss combined with PTEN loss, a known driver of PCa. Combined loss of PTEN and ZFP36 expression was associated with increased risk of recurrence in multiple independent primary PCa cohorts, and significantly reduced overall survival and time to progression following castration in genetically engineered mouse models. ZFP36 loss alters the cell state that is driven by PTEN loss, demonstrated by positive enrichment of gene sets including EMT, inflammation, TNFα/NF-κB, IL6-JAK/STAT3. ZFP36 loss also induces enrichment of multiple gene sets involved in cell migration, chemotaxis, and proliferation. Use of the NF-κB inhibitor dimethylaminoparthenolide induced significant therapeutic responses in tumors with PTEN and ZFP36 co-loss and reversed castration resistance. This work identifies a novel molecular mechanism driving phenotypic plasticity and castration resistance through loss of ZFP36 expression, that can be reversed by inhibition of NF-κB activity.

Competing Interest Statement

C. J. Sweeney is a stockholder in Leuchemix. All other authors declare no financial interests.

Footnotes

  • Conflict of interest C. J. Sweeney is a stockholder in Leuchemix. All other authors declare no financial interests.

  • Relevant data from two clinical trials has been added.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted March 26, 2023.
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Loss of tristetraprolin activates NF-κB induced phenotypic plasticity and primes transition to lethal prostate cancer
Katherine L. Morel, Anis A. Hamid, Beatriz G. Falcón, Jagpreet S. Nanda, Simon Linder, Andries M. Bergman, Henk van der Poel, Ingrid Hofland, Elise M. Bekers, Shana Trostel, Scott Wilkinson, Anson T. Ku, Deborah L. Burkhart, Minhyung Kim, Jina Kim, Jasmine T. Plummer, Sungyong You, Adam G. Sowalsky, Wilbert Zwart, Christopher J. Sweeney, Leigh Ellis
bioRxiv 2022.08.05.500896; doi: https://doi.org/10.1101/2022.08.05.500896
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Loss of tristetraprolin activates NF-κB induced phenotypic plasticity and primes transition to lethal prostate cancer
Katherine L. Morel, Anis A. Hamid, Beatriz G. Falcón, Jagpreet S. Nanda, Simon Linder, Andries M. Bergman, Henk van der Poel, Ingrid Hofland, Elise M. Bekers, Shana Trostel, Scott Wilkinson, Anson T. Ku, Deborah L. Burkhart, Minhyung Kim, Jina Kim, Jasmine T. Plummer, Sungyong You, Adam G. Sowalsky, Wilbert Zwart, Christopher J. Sweeney, Leigh Ellis
bioRxiv 2022.08.05.500896; doi: https://doi.org/10.1101/2022.08.05.500896

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