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Locating cellular contents during cryoFIB milling by cellular secondary-electron imaging

Chao Lin, Li Zhang, Ziying Zhang, Yifeng Jiang, View ORCID ProfileXueming Li
doi: https://doi.org/10.1101/2022.08.18.504468
Chao Lin
1Key Laboratory for Protein Sciences of Ministry of Education, School of Life Sciences, Tsinghua University, Beijing 100084, China
2School of Life Sciences, Tsinghua University, Beijing 100084, China
3Tsinghua-Peking Joint Center for Life Sciences, Beijing 100084, China
4Beijing Frontier Research Center for Biological Structure, Beijing 100084, China
5Advanced Innovation Center for Structural Biology, Beijing 100084, China
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Li Zhang
1Key Laboratory for Protein Sciences of Ministry of Education, School of Life Sciences, Tsinghua University, Beijing 100084, China
2School of Life Sciences, Tsinghua University, Beijing 100084, China
3Tsinghua-Peking Joint Center for Life Sciences, Beijing 100084, China
4Beijing Frontier Research Center for Biological Structure, Beijing 100084, China
5Advanced Innovation Center for Structural Biology, Beijing 100084, China
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Ziying Zhang
1Key Laboratory for Protein Sciences of Ministry of Education, School of Life Sciences, Tsinghua University, Beijing 100084, China
2School of Life Sciences, Tsinghua University, Beijing 100084, China
3Tsinghua-Peking Joint Center for Life Sciences, Beijing 100084, China
4Beijing Frontier Research Center for Biological Structure, Beijing 100084, China
5Advanced Innovation Center for Structural Biology, Beijing 100084, China
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Yifeng Jiang
6ZEISS Microscopy Customer Center, Beijing laboratory, Beijing 100088, China
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Xueming Li
1Key Laboratory for Protein Sciences of Ministry of Education, School of Life Sciences, Tsinghua University, Beijing 100084, China
2School of Life Sciences, Tsinghua University, Beijing 100084, China
3Tsinghua-Peking Joint Center for Life Sciences, Beijing 100084, China
4Beijing Frontier Research Center for Biological Structure, Beijing 100084, China
5Advanced Innovation Center for Structural Biology, Beijing 100084, China
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  • ORCID record for Xueming Li
  • For correspondence: lixueming@tsinghua.edu.cn
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Abstract

Cryo-electron tomography (cryoET) is a powerful technique that enables the direct study of the molecular structure of tissues and cells. Cryo-focused ion beam (cryoFIB) milling plays an important role in preparation of high-quality thin lamellar samples for cryoET studies, promoting the rapid development of cryoET in recent years. However, locating the regions of interest in a large cell or tissue during cryoFIB milling remains a major challenge limiting cryoET applications on arbitrary biological samples. Here, we report an on-the-fly location method based on cellular secondary electron imaging (CSEI). CSEI is derived from a basic imaging function of the cryoFIB instruments and enables high-contrast imaging of the cellular contents of frozen hydrated biological samples, highlighted by that both fluorescent labels and additional devices are not required. The present work discusses the imaging principles and settings for optimizing CSEI. Tests on several commercially available cryoFIB instruments demonstrated that CSEI was feasible on mainstream instruments to observe all types of cellular contents and was reliable under different milling conditions. Assisted by CSEI, we established a simple milling-location workflow and tested it using the basal body of Chlamydomonas reinhardtii.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted August 19, 2022.
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Locating cellular contents during cryoFIB milling by cellular secondary-electron imaging
Chao Lin, Li Zhang, Ziying Zhang, Yifeng Jiang, Xueming Li
bioRxiv 2022.08.18.504468; doi: https://doi.org/10.1101/2022.08.18.504468
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Locating cellular contents during cryoFIB milling by cellular secondary-electron imaging
Chao Lin, Li Zhang, Ziying Zhang, Yifeng Jiang, Xueming Li
bioRxiv 2022.08.18.504468; doi: https://doi.org/10.1101/2022.08.18.504468

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