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Photophysical studies at cryogenic temperature reveal a novel photoswitching mechanism of rsEGFP2

Angela M. R. Mantovanelli, Oleksandr Glushonkov, Virgile Adam, Jip Wulffele, Daniel Thédié, Martin Byrdin, Ingo Gregor, View ORCID ProfileOleksii Nevskyi, Jörg Enderlein, View ORCID ProfileDominique Bourgeois
doi: https://doi.org/10.1101/2022.08.22.504779
Angela M. R. Mantovanelli
†Institut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, 38044 Grenoble, France
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Oleksandr Glushonkov
†Institut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, 38044 Grenoble, France
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Virgile Adam
†Institut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, 38044 Grenoble, France
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Jip Wulffele
†Institut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, 38044 Grenoble, France
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Daniel Thédié
†Institut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, 38044 Grenoble, France
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Martin Byrdin
†Institut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, 38044 Grenoble, France
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Ingo Gregor
‡Institute of Physics−Biophysics, Georg August University, 37077 Göttingen, Germany
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Oleksii Nevskyi
‡Institute of Physics−Biophysics, Georg August University, 37077 Göttingen, Germany
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  • ORCID record for Oleksii Nevskyi
Jörg Enderlein
‡Institute of Physics−Biophysics, Georg August University, 37077 Göttingen, Germany
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Dominique Bourgeois
†Institut de Biologie Structurale, CNRS, Université Grenoble Alpes, CEA, IBS, 38044 Grenoble, France
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  • ORCID record for Dominique Bourgeois
  • For correspondence: dominique.bourgeois@ibs.fr
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ABSTRACT

Single-molecule-localization-microscopy (SMLM) at cryogenic temperature opens new avenues to investigate intact biological samples at the nanoscale and perform cryo-correlative studies. Genetically encoded fluorescent proteins (FPs) are markers of choice for cryo-SMLM, but their reduced conformational flexibility below the glass transition temperature hampers efficient photoswitching at low temperature. We investigated cryo-switching of rsEGFP2, one of the most efficient reversibly switchable fluorescent protein at ambient temperature due to facile cis-trans isomerization of the chromophore. UV-visible microspectrophotometry and X-ray crystallography revealed a completely different switching mechanism at ∼110 K. At this cryogenic temperature, on-off photoswitching involves the formation of 2 dark states with blue shifted absorption relative to that of the trans protonated chromophore populated at ambient temperature. Only one of these dark states can be switched back to the fluorescent state by 405 nm light, while both of them are sensitive to UV light at 355 nm. The rsEGFP2 photoswitching mechanism discovered in this work adds to the panoply of known switching mechanisms in fluorescent proteins. It suggests that employing 355 nm light in cryo-SMLM experiments using rsEGFP2 or possibly other FPs could improve the achievable effective labeling efficiency in this technique.

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Competing Interest Statement

The authors have declared no competing interest.

  • ABBREVIATIONS

    SMLM
    single molecule localization microscopy;
    (d)STORM
    stochastic optical reconstruction microscopy;
    PAINT
    point accumulation in nanoscale topography;
    PALM
    photoactivation localization microscopy;
    RT
    room temperature;
    CT
    cryogenic temperature;
    FPs
    fluorescent proteins;
    RSFPs
    reversibly switchable fluorescent proteins;
    PCFPs
    photoconvertible fluorescent proteins;
    CLEM
    correlative light and electron microscopy;
    EPR
    electron paramagnetic resonance;
    ESRF
    European Synchrotron Radiation Facility;
    NPC
    nuclear pore complex.
  • Copyright 
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    Posted August 22, 2022.
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    Photophysical studies at cryogenic temperature reveal a novel photoswitching mechanism of rsEGFP2
    Angela M. R. Mantovanelli, Oleksandr Glushonkov, Virgile Adam, Jip Wulffele, Daniel Thédié, Martin Byrdin, Ingo Gregor, Oleksii Nevskyi, Jörg Enderlein, Dominique Bourgeois
    bioRxiv 2022.08.22.504779; doi: https://doi.org/10.1101/2022.08.22.504779
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    Photophysical studies at cryogenic temperature reveal a novel photoswitching mechanism of rsEGFP2
    Angela M. R. Mantovanelli, Oleksandr Glushonkov, Virgile Adam, Jip Wulffele, Daniel Thédié, Martin Byrdin, Ingo Gregor, Oleksii Nevskyi, Jörg Enderlein, Dominique Bourgeois
    bioRxiv 2022.08.22.504779; doi: https://doi.org/10.1101/2022.08.22.504779

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