Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

DNA-PAINT single-particle tracking (DNA-PAINT-SPT) enables extended single-molecule studies of membrane protein interactions

View ORCID ProfileChristian Niederauer, View ORCID ProfileChikim Nguyen, View ORCID ProfileMiles Wang-Henderson, View ORCID ProfileJohannes Stein, View ORCID ProfileSebastian Strauss, View ORCID ProfileAlex Cumberworth, View ORCID ProfileFlorian Stehr, View ORCID ProfileRalf Jungmann, View ORCID ProfilePetra Schwille, View ORCID ProfileKristina A. Ganzinger
doi: https://doi.org/10.1101/2022.08.25.503948
Christian Niederauer
1AMOLF, Amsterdam, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Christian Niederauer
Chikim Nguyen
1AMOLF, Amsterdam, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Chikim Nguyen
Miles Wang-Henderson
1AMOLF, Amsterdam, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Miles Wang-Henderson
Johannes Stein
2Max Planck Institute of Biochemistry, Martinsried, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Johannes Stein
Sebastian Strauss
2Max Planck Institute of Biochemistry, Martinsried, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Sebastian Strauss
Alex Cumberworth
1AMOLF, Amsterdam, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Alex Cumberworth
Florian Stehr
2Max Planck Institute of Biochemistry, Martinsried, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Florian Stehr
Ralf Jungmann
2Max Planck Institute of Biochemistry, Martinsried, Germany
3Faculty of Physics, Ludwig Maximilian University, Munich, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Ralf Jungmann
Petra Schwille
2Max Planck Institute of Biochemistry, Martinsried, Germany
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Petra Schwille
Kristina A. Ganzinger
1AMOLF, Amsterdam, The Netherlands
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Kristina A. Ganzinger
  • For correspondence: k.ganzinger@amolf.nl
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

DNA-PAINT based single-particle tracking (DNA-PAINT-SPT) has recently significantly enhanced observation times in in vitro SPT experiments by overcoming the constraints of fluorophore photobleaching. However, with the reported implementation, only a single target can be imaged and the technique cannot be applied straight to live cell imaging. Here we report on leveraging this technique from a proof-of-principle implementation to a useful tool for the SPT community by introducing simultaneous live cell dual-colour DNA-PAINT-SPT for quantifying protein dimerisation and tracking proteins in living cell membranes, demonstrating its improved performance over single-dye SPT.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted August 25, 2022.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
DNA-PAINT single-particle tracking (DNA-PAINT-SPT) enables extended single-molecule studies of membrane protein interactions
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
DNA-PAINT single-particle tracking (DNA-PAINT-SPT) enables extended single-molecule studies of membrane protein interactions
Christian Niederauer, Chikim Nguyen, Miles Wang-Henderson, Johannes Stein, Sebastian Strauss, Alex Cumberworth, Florian Stehr, Ralf Jungmann, Petra Schwille, Kristina A. Ganzinger
bioRxiv 2022.08.25.503948; doi: https://doi.org/10.1101/2022.08.25.503948
Digg logo Reddit logo Twitter logo Facebook logo Google logo LinkedIn logo Mendeley logo
Citation Tools
DNA-PAINT single-particle tracking (DNA-PAINT-SPT) enables extended single-molecule studies of membrane protein interactions
Christian Niederauer, Chikim Nguyen, Miles Wang-Henderson, Johannes Stein, Sebastian Strauss, Alex Cumberworth, Florian Stehr, Ralf Jungmann, Petra Schwille, Kristina A. Ganzinger
bioRxiv 2022.08.25.503948; doi: https://doi.org/10.1101/2022.08.25.503948

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Biophysics
Subject Areas
All Articles
  • Animal Behavior and Cognition (4118)
  • Biochemistry (8825)
  • Bioengineering (6529)
  • Bioinformatics (23481)
  • Biophysics (11802)
  • Cancer Biology (9221)
  • Cell Biology (13335)
  • Clinical Trials (138)
  • Developmental Biology (7442)
  • Ecology (11422)
  • Epidemiology (2066)
  • Evolutionary Biology (15171)
  • Genetics (10449)
  • Genomics (14054)
  • Immunology (9184)
  • Microbiology (22186)
  • Molecular Biology (8821)
  • Neuroscience (47615)
  • Paleontology (350)
  • Pathology (1431)
  • Pharmacology and Toxicology (2492)
  • Physiology (3736)
  • Plant Biology (8087)
  • Scientific Communication and Education (1438)
  • Synthetic Biology (2222)
  • Systems Biology (6042)
  • Zoology (1254)