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CRISPR/Cas-based precision gene replacement in plants via homologous recombination-independent approaches

View ORCID ProfileTien Van Vu, Gah-Hyun Lim, Seung Hee Choi, Ju Yeon Moon, Ngan Thi Nguyen, Swati Das, Mil Thi Tran, Yeon Woo Sung, Jihae Kim, Young Jong Song, Suk Weon Kim, Jae Cheol Jeong, View ORCID ProfileJae-Yean Kim
doi: https://doi.org/10.1101/2022.08.27.505510
Tien Van Vu
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
2National Key Laboratory for Plant Cell Biotechnology, Agricultural Genetics Institute, Km 02, Pham Van Dong Road, Co Nhue 1, Bac Tu Liem, Hanoi 11917, Vietnam
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  • For correspondence: tienvu.agi@gmail.com kimjy@gnu.ac.kr
Gah-Hyun Lim
3Department of Biological Sciences, Pusan National University, Busan 46241, Republic of Korea
4Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup, 56212, Republic of Korea
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Seung Hee Choi
4Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup, 56212, Republic of Korea
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Ju Yeon Moon
4Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup, 56212, Republic of Korea
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Ngan Thi Nguyen
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
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Swati Das
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
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Mil Thi Tran
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
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Yeon Woo Sung
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
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Jihae Kim
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
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Young Jong Song
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
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Suk Weon Kim
4Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup, 56212, Republic of Korea
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Jae Cheol Jeong
4Biological Resource Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup, 56212, Republic of Korea
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Jae-Yean Kim
1Division of Applied Life Science (BK21 FOUR Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Republic of Korea
5Nulla Bio Inc 501 Jinju-daero, Jinju 52828, Republic of Korea
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  • ORCID record for Jae-Yean Kim
  • For correspondence: tienvu.agi@gmail.com kimjy@gnu.ac.kr
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Abstract

Precision gene editing has been recently achieved by homology-directed gene targeting (HGT) and prime editing (PE), but implementation remains challenging in plants. Here, we report a novel tool for precision genome editing in plants employing microhomology-mediated end joining (MMEJ). The MMEJ-mediated precise gene replacement produced much higher targeted editing efficiencies than the cNHEJ, up to 8.89 %, 4.47 %, and 8.98 % in tomato, lettuce, and cabbage, respectively.

Competing Interest Statement

The authors have applied for Korean patents (10-2021-0089814) and PCT patents (PCT-KR2021-008727) based on the results reported in this paper.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted August 27, 2022.
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CRISPR/Cas-based precision gene replacement in plants via homologous recombination-independent approaches
Tien Van Vu, Gah-Hyun Lim, Seung Hee Choi, Ju Yeon Moon, Ngan Thi Nguyen, Swati Das, Mil Thi Tran, Yeon Woo Sung, Jihae Kim, Young Jong Song, Suk Weon Kim, Jae Cheol Jeong, Jae-Yean Kim
bioRxiv 2022.08.27.505510; doi: https://doi.org/10.1101/2022.08.27.505510
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CRISPR/Cas-based precision gene replacement in plants via homologous recombination-independent approaches
Tien Van Vu, Gah-Hyun Lim, Seung Hee Choi, Ju Yeon Moon, Ngan Thi Nguyen, Swati Das, Mil Thi Tran, Yeon Woo Sung, Jihae Kim, Young Jong Song, Suk Weon Kim, Jae Cheol Jeong, Jae-Yean Kim
bioRxiv 2022.08.27.505510; doi: https://doi.org/10.1101/2022.08.27.505510

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