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Mitochondrial protein import clogging as a mechanism of disease

Liam P. Coyne, Xiaowen Wang, Jiyao Song, Ebbing de Jong, Karin Schneider, Paul T. Massa, Frank A. Middleton, Thomas Becker, Xin Jie Chen
doi: https://doi.org/10.1101/2022.09.20.508789
Liam P. Coyne
1Department of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
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Xiaowen Wang
1Department of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
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Jiyao Song
2Institute of Biochemistry and Molecular Biology, Faculty of Medicine, University of Freiburg, Freiburg, Germany
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Ebbing de Jong
3Proteomics and Mass Spectrometry Core Facility, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
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Karin Schneider
4Department of Microbiology and Immunology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
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Paul T. Massa
4Department of Microbiology and Immunology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
5Department of Neurology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
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Frank A. Middleton
1Department of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
6Department of Neuroscience and Physiology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
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Thomas Becker
7Institute of Biochemistry and Molecular Biology, Faculty of Medicine, University of Bonn, Bonn, Germany
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Xin Jie Chen
1Department of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
6Department of Neuroscience and Physiology, State University of New York Upstate Medical University, Syracuse, NY 13210, USA
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  • For correspondence: chenx@upstate.edu
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Abstract

Mitochondrial biogenesis requires the import of >1,000 mitochondrial preproteins from the cytosol. Most studies on mitochondrial protein import are focused on the core import machinery. Whether and how the biophysical properties of substrate preproteins affect overall import efficiency is underexplored. Here, we show that protein traffic into mitochondria is disrupted by amino acid substitutions in a single substrate preprotein. Pathogenic missense mutations in adenine nucleotide translocase 1 (Ant1), and its yeast ortholog Aac2, cause the protein to accumulate along the protein import pathway, thereby obstructing general protein translocation into mitochondria. This impairs mitochondrial respiration, cytosolic proteostasis and cell viability independent of Ant1’s nucleotide transport activity. The mutations act synergistically, as double mutant Aac2/Ant1 cause severe clogging primarily at the Translocase of the Outer Membrane (TOM) complex. This confers extreme toxicity in yeast. In mice, expression of a super-clogger Ant1 variant led to an age-dependent dominant myopathy that phenocopies Ant1-induced human disease, suggesting clogging as a mechanism of disease. We propose that secondary structures of mitochondrial preproteins play an essential role in preventing clogging and disease.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 21, 2022.
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Mitochondrial protein import clogging as a mechanism of disease
Liam P. Coyne, Xiaowen Wang, Jiyao Song, Ebbing de Jong, Karin Schneider, Paul T. Massa, Frank A. Middleton, Thomas Becker, Xin Jie Chen
bioRxiv 2022.09.20.508789; doi: https://doi.org/10.1101/2022.09.20.508789
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Mitochondrial protein import clogging as a mechanism of disease
Liam P. Coyne, Xiaowen Wang, Jiyao Song, Ebbing de Jong, Karin Schneider, Paul T. Massa, Frank A. Middleton, Thomas Becker, Xin Jie Chen
bioRxiv 2022.09.20.508789; doi: https://doi.org/10.1101/2022.09.20.508789

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