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Cd-induced cytosolic proteome changes in the cyanobacterium Anabaena sp. PCC7120 are mediated by LexA as one of the regulatory proteins

Akanksha Srivastava, Arvind Kumar, Subhankar Biswas, Vaibhav Srivastava, View ORCID ProfileHema Rajaram, View ORCID ProfileYogesh Mishra
doi: https://doi.org/10.1101/2022.09.23.509143
Akanksha Srivastava
1Department of Botany, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi-221005, India
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Arvind Kumar
2Molecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai-400085, India
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Subhankar Biswas
1Department of Botany, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi-221005, India
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Vaibhav Srivastava
3Division of Glycoscience, Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm-10691, Sweden
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Hema Rajaram
2Molecular Biology Division, Bhabha Atomic Research Centre, Trombay, Mumbai-400085, India
4Homi Bhabha National Institute, Anushakti Nagar, Mumbai-400094, India
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  • For correspondence: hemaraj@barc.gov.in ymishra@bhu.ac.in
Yogesh Mishra
1Department of Botany, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi-221005, India
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  • For correspondence: hemaraj@barc.gov.in ymishra@bhu.ac.in
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Abstract

LexA, a well-characterized transcriptional repressor of the SOS genes in heterotrophic bacteria, has been shown to regulate diverse genes in cyanobacteria. An earlier study showed that LexA overexpression in a cyanobacterium, Anabaena sp. PCC7120 reduces its tolerance to Cd stress. This was later shown to be due to modulation of photosynthetic redox poising by LexA under Cd stress. However, in light of the global regulatory nature of LexA and the prior prediction of AnLexA-box in a few heavy metal-responsive genes, we speculated that LexA has a broad role in Cd stress tolerance, with regulation over a variety of Cd stress-responsive genes in addition to the regulation on genes related with photosynthetic redox poising. Thus, to further expand the knowledge on the regulatory role of LexA in Cd stress tolerance, a cytosolic proteome profiling of Anabaena constitutively overexpressing LexA upon Cd stress was performed. The proteomic study revealed 25 differentially accumulated proteins (DAPs) in response to the combined effect of LexA overexpression and Cd stress, and the other 11 DAPs exclusively in response to either LexA overexpression or Cd stress. The 36 identified proteins were related with a variety of functions, including photosynthesis, carbon metabolism, antioxidative defence, protein turnover, chaperones, post-transcriptional modifications, and a few unknown and hypothetical proteins. The regulation of LexA on corresponding genes, as well as six previously reported Cd efflux transporters, was further validated by the presence of AnLexA-boxes, transcript, and/or promoter analyses. In a nutshell, this study identifies the regulation of LexA on several genes and proteins of various functional categories in Anabaena that are responsive to Cd stress, hence expanding the regulatory role of LexA under Cd stress.

Highlights

  • LexA overexpression was earlier shown to decrease Cd stress tolerance in Anabaena.

  • We examined the combined effect of LexA overexpression and Cd on Anabaena proteome.

  • Upon LexA overexpression or Cd stress or both, 36 differential proteins were found.

  • In silico, transcript and EMSA proved LexA regulation on them and few transporters.

  • The findings of this study extended the regulatory role of LexA in Cd tolerance.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 23, 2022.
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Cd-induced cytosolic proteome changes in the cyanobacterium Anabaena sp. PCC7120 are mediated by LexA as one of the regulatory proteins
Akanksha Srivastava, Arvind Kumar, Subhankar Biswas, Vaibhav Srivastava, Hema Rajaram, Yogesh Mishra
bioRxiv 2022.09.23.509143; doi: https://doi.org/10.1101/2022.09.23.509143
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Cd-induced cytosolic proteome changes in the cyanobacterium Anabaena sp. PCC7120 are mediated by LexA as one of the regulatory proteins
Akanksha Srivastava, Arvind Kumar, Subhankar Biswas, Vaibhav Srivastava, Hema Rajaram, Yogesh Mishra
bioRxiv 2022.09.23.509143; doi: https://doi.org/10.1101/2022.09.23.509143

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