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SIRT1 regulates DNA damage signaling through the PP4 phosphatase complex

View ORCID ProfileGeorge Rasti, Maximilian Becker, View ORCID ProfileBerta N. Vazquez, View ORCID ProfileMaria Espinosa-Alcantud, View ORCID ProfileIrene Fernández-Duran, View ORCID ProfileAndrés Gámez-García, Jessica Gonzalez-Nieto, View ORCID ProfileLaia Bosch-Presegué, Anna Marazuela-Duque, View ORCID ProfileSandra Segura-Bayona, View ORCID ProfileAlessandro Ianni, View ORCID ProfileJoan-Josep Bech-Serra, Michael Scher, Lourdes Serrano, View ORCID ProfileUma Shankavaram, View ORCID ProfileHediye Erdjument-Bromage, View ORCID ProfilePaul Tempst, View ORCID ProfileDanny Reinberg, View ORCID ProfileMireia Olivella, View ORCID ProfileTravis Stracker, Carolina de la Torre, View ORCID ProfileAlejandro Vaquero
doi: https://doi.org/10.1101/2022.09.29.510108
George Rasti
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
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Maximilian Becker
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
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Berta N. Vazquez
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
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Maria Espinosa-Alcantud
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
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Irene Fernández-Duran
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
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Andrés Gámez-García
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
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Jessica Gonzalez-Nieto
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
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Laia Bosch-Presegué
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
3Tissue Repair and Regeneration Lab, Sciences and Methodology Department, Universitat de Vic, Universitat Central de Catalunya, Vic, Spain
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Anna Marazuela-Duque
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
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Sandra Segura-Bayona
4Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Barcelona, Spain
5The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK
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Alessandro Ianni
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
6Department of Cardiac Development and Remodeling, Max-Planck-Institute for Heart and Lung Research, Ludwigstrasse 43, 61231 Bad Nauheim, Germany
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Joan-Josep Bech-Serra
7Proteomic Unit, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
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Michael Scher
8Howard Hughes Medical Institute, Division of Nucleic Acids Enzymology, Department of Biochemistry, University of Medicine and Dentistry of New Jersey, Robert Wood Johnson Medical School, New Jersey 08854 USA
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Lourdes Serrano
9Department of Science, BMCC, The City University of New York (CUNY), 199 Chambers Street N699P, New York, NY 10007, USA
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Uma Shankavaram
10Radiation Oncology Branch, National Cancer Institute, Bethesda, Maryland, 20892, USA
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Hediye Erdjument-Bromage
11Molecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA
12Department of Cell Biology, New York University School of Medicine, New York, NY 10016, USA
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Paul Tempst
11Molecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA
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Danny Reinberg
8Howard Hughes Medical Institute, Division of Nucleic Acids Enzymology, Department of Biochemistry, University of Medicine and Dentistry of New Jersey, Robert Wood Johnson Medical School, New Jersey 08854 USA
13Howard Hughes Medical Institute, Department of Biochemistry, New York University School of Medicine, New York, 10016, USA
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Mireia Olivella
14Bioinfomatics and Medical Statistics Group, Faculty of Science, Technology and Engineering. University of Vic-Central University of Catalonia, Vic, Spain
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Travis Stracker
4Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Barcelona, Spain
10Radiation Oncology Branch, National Cancer Institute, Bethesda, Maryland, 20892, USA
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Carolina de la Torre
7Proteomic Unit, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
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Alejandro Vaquero
1Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Ctra de Can Ruti, Camí de les Escoles s/n, 08916, Badalona, Barcelona, Spain
2Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Av. Gran Via de l’Hospitalet, 199-203, 08908 L’Hospitalet de Llobregat, Barcelona, Spain
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  • For correspondence: avaquero@carrerasresearch.org
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ABSTRACT

The Sirtuin family of NAD+-dependent enzymes plays an important role in maintaining genome stability upon stress. Several mammalian Sirtuins have been linked directly or indirectly to the regulation of DNA damage during replication through Homologous recombination (HR). The role of one of them, SIRT1, is intriguing as it seems to have a general regulatory role in the DNA damage response (DDR) that has not yet been addressed. SIRT1-deficient cells show impaired DDR reflected in a decrease in repair capacity, increased genome instability and decreased levels of γH2AX. Here we unveil a close functional antagonism between SIRT1 and the PP4 phosphatase multiprotein complex in the regulation of the DDR. Upon DNA damage, SIRT1 interacts specifically with the catalytical subunit PP4c and promotes its inhibition by deacetylating the WH1 domain of the regulatory subunits PP4R3α/β. This in turn regulates γH2AX and RPA2 phosphorylation, two key events in the signaling of DNA damage and repair by HR. We propose a mechanism whereby during stress, SIRT1 signaling ensures a global control of DNA damage signaling through PP4.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵¥ The authors wish it to be known that, in their opinion, the first 2 authors should be regarded as joint First Authors

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted September 30, 2022.
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SIRT1 regulates DNA damage signaling through the PP4 phosphatase complex
George Rasti, Maximilian Becker, Berta N. Vazquez, Maria Espinosa-Alcantud, Irene Fernández-Duran, Andrés Gámez-García, Jessica Gonzalez-Nieto, Laia Bosch-Presegué, Anna Marazuela-Duque, Sandra Segura-Bayona, Alessandro Ianni, Joan-Josep Bech-Serra, Michael Scher, Lourdes Serrano, Uma Shankavaram, Hediye Erdjument-Bromage, Paul Tempst, Danny Reinberg, Mireia Olivella, Travis Stracker, Carolina de la Torre, Alejandro Vaquero
bioRxiv 2022.09.29.510108; doi: https://doi.org/10.1101/2022.09.29.510108
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SIRT1 regulates DNA damage signaling through the PP4 phosphatase complex
George Rasti, Maximilian Becker, Berta N. Vazquez, Maria Espinosa-Alcantud, Irene Fernández-Duran, Andrés Gámez-García, Jessica Gonzalez-Nieto, Laia Bosch-Presegué, Anna Marazuela-Duque, Sandra Segura-Bayona, Alessandro Ianni, Joan-Josep Bech-Serra, Michael Scher, Lourdes Serrano, Uma Shankavaram, Hediye Erdjument-Bromage, Paul Tempst, Danny Reinberg, Mireia Olivella, Travis Stracker, Carolina de la Torre, Alejandro Vaquero
bioRxiv 2022.09.29.510108; doi: https://doi.org/10.1101/2022.09.29.510108

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