Efficient minimizer orders for large values of k using minimum decycling sets

David Pellow; Lianrong Pu; Baris Ekim; Lior Kotlar; Bonnie Berger; Ron Shamir; Yaron Orenstein

doi:10.1101/2022.10.18.512682

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Efficient minimizer orders for large values of k using minimum decycling sets

David Pellow, Lianrong Pu, Baris Ekim, Lior Kotlar, Bonnie Berger, Ron Shamir, View ORCID ProfileYaron Orenstein

doi: https://doi.org/10.1101/2022.10.18.512682

David Pellow

1Blavatnik School of Computer Science, Tel-Aviv University, Israel

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Lianrong Pu

1Blavatnik School of Computer Science, Tel-Aviv University, Israel

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Baris Ekim

2Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA

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Lior Kotlar

3Department of Computer Science, Ben-Gurion University, Israel

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Bonnie Berger

2Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA

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Ron Shamir

1Blavatnik School of Computer Science, Tel-Aviv University, Israel

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Yaron Orenstein

4Department of Computer Science, Bar-Ilan University, Israel

5The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Israel

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ORCID record for Yaron Orenstein
For correspondence: yaron.orenstein@gmail.com

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Posted October 21, 2022.

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Efficient minimizer orders for large values of k using minimum decycling sets

David Pellow, Lianrong Pu, Baris Ekim, Lior Kotlar, Bonnie Berger, Ron Shamir, Yaron Orenstein

bioRxiv 2022.10.18.512682; doi: https://doi.org/10.1101/2022.10.18.512682

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Efficient minimizer orders for large values of k using minimum decycling sets

David Pellow, Lianrong Pu, Baris Ekim, Lior Kotlar, Bonnie Berger, Ron Shamir, Yaron Orenstein

bioRxiv 2022.10.18.512682; doi: https://doi.org/10.1101/2022.10.18.512682

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