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Patterning of phase-separated condensates by Dnd1 controls cell fate

Kim Joana Westerich, Katsiaryna Tarbashevich, Antra Gupta, Mingzhao Zhu, Kenneth Hull, Daniel Romo, Theresa Gross-Thebing, View ORCID ProfileErez Raz
doi: https://doi.org/10.1101/2022.10.20.512863
Kim Joana Westerich
1Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
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Katsiaryna Tarbashevich
1Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
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Antra Gupta
1Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
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Mingzhao Zhu
2Department of Chemistry & Biochemistry, Baylor University, Waco, Texas 76706, United States
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Kenneth Hull
2Department of Chemistry & Biochemistry, Baylor University, Waco, Texas 76706, United States
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Daniel Romo
2Department of Chemistry & Biochemistry, Baylor University, Waco, Texas 76706, United States
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Theresa Gross-Thebing
1Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
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Erez Raz
1Institute of Cell Biology, Center for Molecular Biology of Inflammation, University of Münster; 48149 Münster, Germany
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  • ORCID record for Erez Raz
  • For correspondence: erez.raz@uni-muenster.de
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SUMMARY

Germ granules, condensates of phase-separated RNA and protein, are essential for germline development, but how these molecules are organized within the granules and whether such an organization is relevant for germ cell fate is unclear. Combining three-dimensional in vivo structural and functional analyses, we study the dynamic spatial organization of molecules within zebrafish germ granules. We find that the vertebrate-specific Dead end protein is essential for positioning nanos3 RNA at the condensates’ periphery, where ribosomes are located. Without Dead end, or when translation is inhibited, nanos3 RNA translocates into granule interiors, far from the ribosomes’ location. These findings reveal the molecular mechanisms controlling the spatial organization of RNA within the phase-separated organelle and the importance of subgranule RNA localization for preserving germ cell totipotency.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted October 20, 2022.
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Patterning of phase-separated condensates by Dnd1 controls cell fate
Kim Joana Westerich, Katsiaryna Tarbashevich, Antra Gupta, Mingzhao Zhu, Kenneth Hull, Daniel Romo, Theresa Gross-Thebing, Erez Raz
bioRxiv 2022.10.20.512863; doi: https://doi.org/10.1101/2022.10.20.512863
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Patterning of phase-separated condensates by Dnd1 controls cell fate
Kim Joana Westerich, Katsiaryna Tarbashevich, Antra Gupta, Mingzhao Zhu, Kenneth Hull, Daniel Romo, Theresa Gross-Thebing, Erez Raz
bioRxiv 2022.10.20.512863; doi: https://doi.org/10.1101/2022.10.20.512863

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