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Ribozyme-phenotype coupling in peptide-based coacervate protocells

Kristian Le Vay, Elia Salibi, Basusree Ghosh, T-Y Dora Tang, View ORCID ProfileHannes Mutschler
doi: https://doi.org/10.1101/2022.10.25.513667
Kristian Le Vay
aFaculty of Chemistry and Chemical Biology, TU Dortmund University, Otto-Hahn-Str. 4a, 44227 Dortmund, E-Mail: ,
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  • For correspondence: hannes.mutschler@tu-dortmund.de kristian.levay@tu-dortmund.de hannes.mutschler@tu-dortmund.de kristian.levay@tu-dortmund.de
Elia Salibi
aFaculty of Chemistry and Chemical Biology, TU Dortmund University, Otto-Hahn-Str. 4a, 44227 Dortmund, E-Mail: ,
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  • For correspondence: hannes.mutschler@tu-dortmund.de kristian.levay@tu-dortmund.de
Basusree Ghosh
bMax-Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstraße 108, 01307 Dresden, E-Mail:
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  • For correspondence: tang@mpi-cbg.de
T-Y Dora Tang
bMax-Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstraße 108, 01307 Dresden, E-Mail:
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  • For correspondence: hannes.mutschler@tu-dortmund.de kristian.levay@tu-dortmund.de tang@mpi-cbg.de
Hannes Mutschler
aFaculty of Chemistry and Chemical Biology, TU Dortmund University, Otto-Hahn-Str. 4a, 44227 Dortmund, E-Mail: ,
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  • ORCID record for Hannes Mutschler
  • For correspondence: hannes.mutschler@tu-dortmund.de kristian.levay@tu-dortmund.de hannes.mutschler@tu-dortmund.de kristian.levay@tu-dortmund.de
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Abstract

Condensed coacervate phases are now understood to be important features of modern cell biology, as well as valuable protocellular models in origin of life studies and synthetic biology. In each of these fields, the development of model systems with varied and tuneable material properties is of great importance for replicating properties of life. Here, we develop a ligase ribozyme system capable of concatenating short RNA fragments into extremely long chains. Our results show that formation of coacervate microdroplets with the ligase ribozyme and poly(L-lysine) enhances ribozyme rate and yield, which in turn increases the length of the anionic polymer component of the system and imparts specific physical properties to the droplets. Droplets containing active ribozyme sequences resist growth, do not wet or spread on unpassivated surfaces, and exhibit reduced transfer of RNA between droplets when compared to controls containing inactive sequences. These altered behaviours, which stem from RNA sequence and catalytic activity, constitute a specific phenotype and potential fitness advantage, opening the door to selection and evolution experiments based on a genotype – phenotype linkage.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted October 25, 2022.
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Ribozyme-phenotype coupling in peptide-based coacervate protocells
Kristian Le Vay, Elia Salibi, Basusree Ghosh, T-Y Dora Tang, Hannes Mutschler
bioRxiv 2022.10.25.513667; doi: https://doi.org/10.1101/2022.10.25.513667
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Ribozyme-phenotype coupling in peptide-based coacervate protocells
Kristian Le Vay, Elia Salibi, Basusree Ghosh, T-Y Dora Tang, Hannes Mutschler
bioRxiv 2022.10.25.513667; doi: https://doi.org/10.1101/2022.10.25.513667

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