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ASO targeting temperature-controlled RBM3 poison exon splicing prevents neurodegeneration in vivo

View ORCID ProfileMarco Preußner, Heather L Smith, Min Zhang, View ORCID ProfileDaniel Hughes, Ann-Kathrin Emmerichs, Silvia Scalzitti, Diego Peretti, Dean Swinden, Alexander Neumann, Tom Haltenhof, View ORCID ProfileGiovanna R Mallucci, Florian Heyd
doi: https://doi.org/10.1101/2022.10.26.513170
Marco Preußner
1Institut für Chemie und Biochemie, RNA Biochemie, Freie Universität Berlin, Takustr. 6, 14195 Berlin, Germany
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  • ORCID record for Marco Preußner
  • For correspondence: florian.heyd@fu-berlin.de gmallucci@altoslabs.com mpreussner@zedat.fu-berlin.de
Heather L Smith
2Altos Labs, Cambridge Institute of Science, Granta Park, Cambridge CB21 6GP, UK
3UK Dementia Research Institute and Department of Clinical Neurosciences, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 OAH, UK
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Min Zhang
1Institut für Chemie und Biochemie, RNA Biochemie, Freie Universität Berlin, Takustr. 6, 14195 Berlin, Germany
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Daniel Hughes
3UK Dementia Research Institute and Department of Clinical Neurosciences, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 OAH, UK
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  • ORCID record for Daniel Hughes
Ann-Kathrin Emmerichs
1Institut für Chemie und Biochemie, RNA Biochemie, Freie Universität Berlin, Takustr. 6, 14195 Berlin, Germany
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Silvia Scalzitti
1Institut für Chemie und Biochemie, RNA Biochemie, Freie Universität Berlin, Takustr. 6, 14195 Berlin, Germany
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Diego Peretti
3UK Dementia Research Institute and Department of Clinical Neurosciences, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 OAH, UK
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Dean Swinden
2Altos Labs, Cambridge Institute of Science, Granta Park, Cambridge CB21 6GP, UK
3UK Dementia Research Institute and Department of Clinical Neurosciences, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 OAH, UK
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Alexander Neumann
1Institut für Chemie und Biochemie, RNA Biochemie, Freie Universität Berlin, Takustr. 6, 14195 Berlin, Germany
4Omiqa Bioinformatics, Berlin, Germany
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Tom Haltenhof
1Institut für Chemie und Biochemie, RNA Biochemie, Freie Universität Berlin, Takustr. 6, 14195 Berlin, Germany
4Omiqa Bioinformatics, Berlin, Germany
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Giovanna R Mallucci
2Altos Labs, Cambridge Institute of Science, Granta Park, Cambridge CB21 6GP, UK
3UK Dementia Research Institute and Department of Clinical Neurosciences, University of Cambridge, Cambridge Biomedical Campus, Cambridge CB2 OAH, UK
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  • ORCID record for Giovanna R Mallucci
  • For correspondence: florian.heyd@fu-berlin.de gmallucci@altoslabs.com mpreussner@zedat.fu-berlin.de
Florian Heyd
1Institut für Chemie und Biochemie, RNA Biochemie, Freie Universität Berlin, Takustr. 6, 14195 Berlin, Germany
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  • For correspondence: florian.heyd@fu-berlin.de gmallucci@altoslabs.com mpreussner@zedat.fu-berlin.de
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Summary

Neurodegenerative diseases become increasingly prevalent in the aging population and currently no cure is available. Increasing expression of the cold-shock protein RBM3 through therapeutic hypothermia is remarkably neuroprotective, but hypothermia poses a health risk itself, strongly limiting its clinical application. Selective upregulation of RBM3 at normothermia thus holds immense therapeutic potential. Here we identify a poison exon that is solely responsible for temperature-controlled RBM3 expression. Genetic removal or ASO-mediated manipulation of this exon yields high RBM3 levels independent of cooling. Notably, a single administration of ASO, using FDA-approved chemistry, results in long-lasting increase of RBM3 expression and remarkable neuroprotection, with prevention of neuronal loss and spongiosis in prion-diseased mice. RBM3-inducing ASOs could thus broadly deliver protection in humans in conditions from acute brain injury to Alzheimer’s disease.

One sentence summary Inducing cold shock protein RBM3 by modulating its alternative splicing at normothermia is neuroprotective in vivo

Competing Interest Statement

A patent application has been filed in relation to this research. There are no other competing interests.

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Posted October 29, 2022.
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ASO targeting temperature-controlled RBM3 poison exon splicing prevents neurodegeneration in vivo
Marco Preußner, Heather L Smith, Min Zhang, Daniel Hughes, Ann-Kathrin Emmerichs, Silvia Scalzitti, Diego Peretti, Dean Swinden, Alexander Neumann, Tom Haltenhof, Giovanna R Mallucci, Florian Heyd
bioRxiv 2022.10.26.513170; doi: https://doi.org/10.1101/2022.10.26.513170
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ASO targeting temperature-controlled RBM3 poison exon splicing prevents neurodegeneration in vivo
Marco Preußner, Heather L Smith, Min Zhang, Daniel Hughes, Ann-Kathrin Emmerichs, Silvia Scalzitti, Diego Peretti, Dean Swinden, Alexander Neumann, Tom Haltenhof, Giovanna R Mallucci, Florian Heyd
bioRxiv 2022.10.26.513170; doi: https://doi.org/10.1101/2022.10.26.513170

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