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FUS regulates RAN translation through modulating the G-quadruplex structure of GGGGCC repeat RNA in C9orf72-linked ALS/FTD

View ORCID ProfileYuzo Fujino, Morio Ueyama, Taro Ishiguro, Daisaku Ozawa, Hayato Ito, View ORCID ProfileToshihiko Sugiki, Asako Murata, Akira Ishiguro, Tania F. Gendron, View ORCID ProfileKohji Mori, Eiichi Tokuda, Tomoya Taminato, Takuya Konno, Akihide Koyama, Yuya Kawabe, Toshihide Takeuchi, Yoshiaki Furukawa, Toshimichi Fujiwara, Manabu Ikeda, Toshiki Mizuno, Hideki Mochizuki, Hidehiro Mizusawa, Keiji Wada, Kinya Ishikawa, View ORCID ProfileOsamu Onodera, Kazuhiko Nakatani, Leonard Petrucelli, View ORCID ProfileHideki Taguchi, View ORCID ProfileYoshitaka Nagai
doi: https://doi.org/10.1101/2022.11.01.514717
Yuzo Fujino
1Department of Neurology, Kindai University Faculty of Medicine, Osaka-Sayama, Osaka 589-8511, Japan
2Department of Neurology, Kyoto Prefectural University of Medicine, Kyoto 602-0841, Japan
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  • ORCID record for Yuzo Fujino
Morio Ueyama
1Department of Neurology, Kindai University Faculty of Medicine, Osaka-Sayama, Osaka 589-8511, Japan
3Department of Neurotherapeutics, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
4Department of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8502, Japan
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Taro Ishiguro
4Department of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8502, Japan
5Department of Neurology and Neurological Science, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo 113-8519, Japan
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Daisaku Ozawa
1Department of Neurology, Kindai University Faculty of Medicine, Osaka-Sayama, Osaka 589-8511, Japan
3Department of Neurotherapeutics, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
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Hayato Ito
6School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Kanagawa 226-8503, Japan
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Toshihiko Sugiki
7Laboratory of Molecular Biophysics, Institute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan
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Asako Murata
8Department of Regulatory Bioorganic Chemistry, The Institute of Scientific and Industrial Research, Osaka University, Ibaraki, Osaka 565-0047, Japan
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Akira Ishiguro
9Research Center for Micro-nano Technology, Hosei University, Koganei, Tokyo 184-0003, Japan
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Tania F. Gendron
10Department of Neuroscience, Mayo Clinic, Jacksonville, FL 32224, USA
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Kohji Mori
11Department of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
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Eiichi Tokuda
12Department of Chemistry, Keio University, Yokohama, Kanagawa 223-8522, Japan
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Tomoya Taminato
1Department of Neurology, Kindai University Faculty of Medicine, Osaka-Sayama, Osaka 589-8511, Japan
3Department of Neurotherapeutics, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
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Takuya Konno
13Department of Neurology, Clinical Neuroscience Branch, Brain Research Institute, Niigata University, Niigata 951-8585, Japan
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Akihide Koyama
13Department of Neurology, Clinical Neuroscience Branch, Brain Research Institute, Niigata University, Niigata 951-8585, Japan
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Yuya Kawabe
11Department of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
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Toshihide Takeuchi
3Department of Neurotherapeutics, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
14Life Science Research Institute, Kindai University, Osaka-Sayama, Osaka 589-8511, Japan
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Yoshiaki Furukawa
12Department of Chemistry, Keio University, Yokohama, Kanagawa 223-8522, Japan
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Toshimichi Fujiwara
7Laboratory of Molecular Biophysics, Institute for Protein Research, Osaka University, Suita, Osaka 565-0871, Japan
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Manabu Ikeda
11Department of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
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Toshiki Mizuno
2Department of Neurology, Kyoto Prefectural University of Medicine, Kyoto 602-0841, Japan
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Hideki Mochizuki
15Department of Neurology, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
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Hidehiro Mizusawa
5Department of Neurology and Neurological Science, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo 113-8519, Japan
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Keiji Wada
4Department of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8502, Japan
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Kinya Ishikawa
5Department of Neurology and Neurological Science, Tokyo Medical and Dental University, Bunkyo-ku, Tokyo 113-8519, Japan
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Osamu Onodera
13Department of Neurology, Clinical Neuroscience Branch, Brain Research Institute, Niigata University, Niigata 951-8585, Japan
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Kazuhiko Nakatani
8Department of Regulatory Bioorganic Chemistry, The Institute of Scientific and Industrial Research, Osaka University, Ibaraki, Osaka 565-0047, Japan
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Leonard Petrucelli
10Department of Neuroscience, Mayo Clinic, Jacksonville, FL 32224, USA
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Hideki Taguchi
6School of Life Science and Technology, Tokyo Institute of Technology, Yokohama, Kanagawa 226-8503, Japan
16Cell Biology Center, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama, Kanagawa 226-8503, Japan
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Yoshitaka Nagai
1Department of Neurology, Kindai University Faculty of Medicine, Osaka-Sayama, Osaka 589-8511, Japan
3Department of Neurotherapeutics, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
4Department of Degenerative Neurological Diseases, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Kodaira, Tokyo 187-8502, Japan
15Department of Neurology, Osaka University Graduate School of Medicine, Suita, Osaka 565-0871, Japan
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  • For correspondence: [email protected]
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Abstract

Abnormal expansions of GGGGCC repeat sequence in the noncoding region of the C9orf72 gene is the most common cause of familial amyotrophic lateral sclerosis and frontotemporal dementia (C9-ALS/FTD). The expanded repeat sequence is translated into dipeptide repeat proteins (DPRs) by noncanonical repeat-associated non-AUG (RAN) translation. Since DPRs play central roles in the pathogenesis of C9-ALS/FTD, we here investigate the regulatory mechanisms of RAN translation, focusing on the effects of RNA-binding proteins (RBPs) targeting GGGGCC repeat RNAs. Using C9-ALS/FTD model flies, we demonstrated that the ALS/FTD-linked RBP FUS suppresses RAN translation and neurodegeneration in an RNA-binding activity-dependent manner. Moreover, we found that FUS directly binds to and modulates the G-quadruplex structure of GGGGCC repeat RNA as an RNA chaperone, resulting in the suppression of RAN translation in vitro. These results reveal a previously unrecognized regulatory mechanism of RAN translation by G-quadruplex-targeting RBPs, providing therapeutic insights for C9-ALS/FTD and other repeat expansion diseases.

Competing Interest Statement

Some of the authors previously belonged to the Department of Neurotherapeutics, Osaka University Graduate School of Medicine, that is an endowment department supported by Nihon Medi-Physics Co., AbbVie GK., Otsuka Pharm Co., Kyowakai Med. Co., Fujiikai Med. Co., Yukioka Hosp., Osaka Gyoumeikan Hosp., Kyorin Co., and Tokuyukai Med. Co.

Footnotes

  • We have performed a series of additional experiments, including in vitro translation assay using FUS-RRMmut protein (Figures 5F and 5G), and immunohistochemistry of fly larvae expressing (G4C2)89 and G-quadruplex-targeting RBPs (Figures 6E and 6F). Corresponding to these additional results, sections on introduction and results were updated. Other changes are as follows. Section on discussion updated to clarify the interpretations of RNA chaperones; Figures 1, 5, 6, 5-S1 revised; Figure 3-S1 added; Key resources tables added; Author orders updated.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted June 07, 2023.
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FUS regulates RAN translation through modulating the G-quadruplex structure of GGGGCC repeat RNA in C9orf72-linked ALS/FTD
Yuzo Fujino, Morio Ueyama, Taro Ishiguro, Daisaku Ozawa, Hayato Ito, Toshihiko Sugiki, Asako Murata, Akira Ishiguro, Tania F. Gendron, Kohji Mori, Eiichi Tokuda, Tomoya Taminato, Takuya Konno, Akihide Koyama, Yuya Kawabe, Toshihide Takeuchi, Yoshiaki Furukawa, Toshimichi Fujiwara, Manabu Ikeda, Toshiki Mizuno, Hideki Mochizuki, Hidehiro Mizusawa, Keiji Wada, Kinya Ishikawa, Osamu Onodera, Kazuhiko Nakatani, Leonard Petrucelli, Hideki Taguchi, Yoshitaka Nagai
bioRxiv 2022.11.01.514717; doi: https://doi.org/10.1101/2022.11.01.514717
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FUS regulates RAN translation through modulating the G-quadruplex structure of GGGGCC repeat RNA in C9orf72-linked ALS/FTD
Yuzo Fujino, Morio Ueyama, Taro Ishiguro, Daisaku Ozawa, Hayato Ito, Toshihiko Sugiki, Asako Murata, Akira Ishiguro, Tania F. Gendron, Kohji Mori, Eiichi Tokuda, Tomoya Taminato, Takuya Konno, Akihide Koyama, Yuya Kawabe, Toshihide Takeuchi, Yoshiaki Furukawa, Toshimichi Fujiwara, Manabu Ikeda, Toshiki Mizuno, Hideki Mochizuki, Hidehiro Mizusawa, Keiji Wada, Kinya Ishikawa, Osamu Onodera, Kazuhiko Nakatani, Leonard Petrucelli, Hideki Taguchi, Yoshitaka Nagai
bioRxiv 2022.11.01.514717; doi: https://doi.org/10.1101/2022.11.01.514717

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