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Transcriptome profiles of eggplant (Solanum melongena) and its wild relative S. dasyphyllum under different levels of osmotic stress provide insights into response mechanisms to drought

View ORCID ProfileGloria Villanueva, View ORCID ProfileSantiago Vilanova, View ORCID ProfileMariola Plazas, View ORCID ProfileJaime Prohens, View ORCID ProfilePietro Gramazio
doi: https://doi.org/10.1101/2022.11.02.514830
Gloria Villanueva
aInstituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022 Valencia, Spain
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  • ORCID record for Gloria Villanueva
  • For correspondence: glovilpa@etsiamn.upv.es
Santiago Vilanova
aInstituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022 Valencia, Spain
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Mariola Plazas
aInstituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022 Valencia, Spain
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Jaime Prohens
aInstituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Camino de Vera 14, 46022 Valencia, Spain
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Pietro Gramazio
bInstituto de Biología Molecular y Celular de Plantas, Consejo Superior de Investigaciones Científicas-Universitat Politècnica de València, Camino de Vera 14, 46022 Valencia, Spain
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Abstract

Defence mechanisms to abiotic stresses, like drought, are very broad and RNA sequencing (RNA-Seq) can help in understanding the complex responses triggered. In this study, we performed RNA-Seq of the transcriptomes of eggplant (Solanum melongena) and its related wild species (S. dasyphyllum) under two PEG concentrations (20% and 30%), two different times (after 0.5 h and 2 h of osmotic stress) and at two plant phenological stages (three and five true fully developed leaves). Solanum dasyphyllum was more tolerant to osmotic stress, and a differential expression pattern of drought-related genes was identified between the two species. Plants subjected to a higher osmotic potential, at a more adult stage and at a higher stress exposure time displayed a higher number of DEGs (differential expressed genes). Gene ontology (GO) enrichment analysis revealed that, compared to S. melongena, S. dasyphyllum triggered the regulation of a wide range of transcription factors (AP2/ERF, DREB, bZIP, WRKY and bHLH). In both species, the abscisic acid (ABA) signaling response pathway played a crucial role leading to stomatal closure. Other important pathways involved in abiotic stresses tolerance including flavonoid, carotenoid and phenylpropanoid biosynthesis, chlorophyll metabolism and photosynthesis pathway among others were found to have a relevant role under both moderate and severe osmotic stresses. Our results reveal that S. dasyphyllum is a potential source of genes for breeding resilient eggplant varieties.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • The surname of the first author was mispelled

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted January 23, 2023.
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Transcriptome profiles of eggplant (Solanum melongena) and its wild relative S. dasyphyllum under different levels of osmotic stress provide insights into response mechanisms to drought
Gloria Villanueva, Santiago Vilanova, Mariola Plazas, Jaime Prohens, Pietro Gramazio
bioRxiv 2022.11.02.514830; doi: https://doi.org/10.1101/2022.11.02.514830
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Transcriptome profiles of eggplant (Solanum melongena) and its wild relative S. dasyphyllum under different levels of osmotic stress provide insights into response mechanisms to drought
Gloria Villanueva, Santiago Vilanova, Mariola Plazas, Jaime Prohens, Pietro Gramazio
bioRxiv 2022.11.02.514830; doi: https://doi.org/10.1101/2022.11.02.514830

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