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Peptide-mediated inhibition of the transcriptional regulator Elongin BC induces apoptosis in cancer cells

Sabrina Fischer, Van Tuan Trinh, Clara Simon, View ORCID ProfileLisa Marie Weber, View ORCID ProfileIgnasi Formé, Andrea Nist, Gert Bange, Frank Abendroth, View ORCID ProfileThorsten Stiewe, Wieland Steinchen, View ORCID ProfileRobert Liefke, Olalla Vázquez
doi: https://doi.org/10.1101/2022.11.04.515028
Sabrina Fischer
1Institute of Molecular Biology and Tumor Research (IMT), University of Marburg, 35043, Germany
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Van Tuan Trinh
2Department of Chemistry, University of Marburg, 35043 Marburg, Germany
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Clara Simon
1Institute of Molecular Biology and Tumor Research (IMT), University of Marburg, 35043, Germany
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Lisa Marie Weber
1Institute of Molecular Biology and Tumor Research (IMT), University of Marburg, 35043, Germany
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  • ORCID record for Lisa Marie Weber
Ignasi Formé
3Protein Analysis Unit, Biomedical Center (BMC), Faculty of Medicine, Ludwig-Maximilians-University (LMU) Munich, 82152 Martinsried, Germany
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Andrea Nist
4Genomics Core Facility, Institute of Molecular Oncology, Member of the German Center for Lung Research (DZL), University of Marburg, 35043 Marburg, Germany
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Gert Bange
2Department of Chemistry, University of Marburg, 35043 Marburg, Germany
5Center for Synthetic Microbiology (SYNMIKRO), University of Marburg, 35043 Marburg, Germany
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Frank Abendroth
2Department of Chemistry, University of Marburg, 35043 Marburg, Germany
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Thorsten Stiewe
4Genomics Core Facility, Institute of Molecular Oncology, Member of the German Center for Lung Research (DZL), University of Marburg, 35043 Marburg, Germany
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  • ORCID record for Thorsten Stiewe
Wieland Steinchen
2Department of Chemistry, University of Marburg, 35043 Marburg, Germany
5Center for Synthetic Microbiology (SYNMIKRO), University of Marburg, 35043 Marburg, Germany
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Robert Liefke
1Institute of Molecular Biology and Tumor Research (IMT), University of Marburg, 35043, Germany
6Department of Hematology, Oncology, and Immunology, University Hospital Giessen and Marburg, 35043 Marburg, Germany
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  • For correspondence: robert.liefke@imt.uni-marburg.de olalla.vazquez@staff.uni-marburg.de
Olalla Vázquez
2Department of Chemistry, University of Marburg, 35043 Marburg, Germany
5Center for Synthetic Microbiology (SYNMIKRO), University of Marburg, 35043 Marburg, Germany
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  • For correspondence: robert.liefke@imt.uni-marburg.de olalla.vazquez@staff.uni-marburg.de
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Abstract

Inhibition of protein-protein interactions (PPIs) via designed peptides is an effective strategy to interfere with their biological functions. The Elongin BC heterodimer (ELOB/C) is involved in transcription elongation and protein turnover by PPIs that involve the so-called BC-box. ELOB and ELOC are commonly upregulated in cancer and essential for cancer cell growth, making them attractive drug targets. However, no strategy has been established to inhibit their functions in cells, so far. Here, we report a peptide that mimics a high-affinity BC-box and tightly binds to the ELOB/C dimer (kD = 0.45 ± 0.03 nM). Our peptide blocks the association of ELOB/C with its interaction partners, both in vitro and in the cellular environment. Cancer cells treated with this peptide inhibitor show decreased cell viability, altered cell cycle and increased apoptosis. Therefore, our work proposes that blocking the BC-box binding pocket of ELOB/C is a feasible strategy to impair the function of the ELOB/C heterodimer and inhibit cancer cell growth. Our peptide inhibitor promises novel mechanistic insights into the biological function of the ELOB/C dimer and offers a starting point for therapeutics linked to ELOB/C dysfunction.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 04, 2022.
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Peptide-mediated inhibition of the transcriptional regulator Elongin BC induces apoptosis in cancer cells
Sabrina Fischer, Van Tuan Trinh, Clara Simon, Lisa Marie Weber, Ignasi Formé, Andrea Nist, Gert Bange, Frank Abendroth, Thorsten Stiewe, Wieland Steinchen, Robert Liefke, Olalla Vázquez
bioRxiv 2022.11.04.515028; doi: https://doi.org/10.1101/2022.11.04.515028
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Peptide-mediated inhibition of the transcriptional regulator Elongin BC induces apoptosis in cancer cells
Sabrina Fischer, Van Tuan Trinh, Clara Simon, Lisa Marie Weber, Ignasi Formé, Andrea Nist, Gert Bange, Frank Abendroth, Thorsten Stiewe, Wieland Steinchen, Robert Liefke, Olalla Vázquez
bioRxiv 2022.11.04.515028; doi: https://doi.org/10.1101/2022.11.04.515028

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