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A comparative atlas of single-cell chromatin accessibility in the human brain
View ORCID ProfileYang Eric Li, View ORCID ProfileSebastian Preissl, View ORCID ProfileMichael Miller, View ORCID ProfileNicholas D. Johnson, View ORCID ProfileZihan Wang, Henry Jiao, View ORCID ProfileChenxu Zhu, View ORCID ProfileZhaoning Wang, View ORCID ProfileYang Xie, View ORCID ProfileOlivier Poirion, View ORCID ProfileColin Kern, View ORCID ProfileAntonio Pinto-Duarte, Wei Tian, Kimberly Siletti, Nora Emerson, Julia Osteen, View ORCID ProfileJacinta Lucero, Lin Lin, Qian Yang, View ORCID ProfileQuan Zhu, View ORCID ProfileSarah Espinoza, Anna Marie Yanny, Julie Nyhus, Nick Dee, Tamara Casper, Nadiya Shapovalova, Daniel Hirschstein, View ORCID ProfileRebecca D. Hodge, Sten Linnarsson, View ORCID ProfileTrygve Bakken, Boaz Levi, View ORCID ProfileC. Dirk Keene, Jingbo Shang, Ed S. Lein, View ORCID ProfileAllen Wang, View ORCID ProfileM. Margarita Behrens, View ORCID ProfileJoseph R. Ecker, View ORCID ProfileBing Ren
doi: https://doi.org/10.1101/2022.11.09.515833
Yang Eric Li
1Department of Cellular and Molecular Medicine, University of California, San Diego, San Diego, CA, USA
Sebastian Preissl
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Michael Miller
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Nicholas D. Johnson
3The Salk Institute for Biological Studies, La Jolla, CA, USA
Zihan Wang
4Department of Computer Science and Engineering, University of California San Diego, CA, USA
Henry Jiao
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Chenxu Zhu
1Department of Cellular and Molecular Medicine, University of California, San Diego, San Diego, CA, USA
Zhaoning Wang
1Department of Cellular and Molecular Medicine, University of California, San Diego, San Diego, CA, USA
Yang Xie
1Department of Cellular and Molecular Medicine, University of California, San Diego, San Diego, CA, USA
Olivier Poirion
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Colin Kern
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Antonio Pinto-Duarte
3The Salk Institute for Biological Studies, La Jolla, CA, USA
Wei Tian
3The Salk Institute for Biological Studies, La Jolla, CA, USA
Kimberly Siletti
5Division of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden
Nora Emerson
3The Salk Institute for Biological Studies, La Jolla, CA, USA
Julia Osteen
3The Salk Institute for Biological Studies, La Jolla, CA, USA
Jacinta Lucero
3The Salk Institute for Biological Studies, La Jolla, CA, USA
Lin Lin
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Qian Yang
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Quan Zhu
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Sarah Espinoza
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
Anna Marie Yanny
6Allen Institute for Brain Science, Seattle, WA, USA
Julie Nyhus
6Allen Institute for Brain Science, Seattle, WA, USA
Nick Dee
6Allen Institute for Brain Science, Seattle, WA, USA
Tamara Casper
6Allen Institute for Brain Science, Seattle, WA, USA
Nadiya Shapovalova
6Allen Institute for Brain Science, Seattle, WA, USA
Daniel Hirschstein
6Allen Institute for Brain Science, Seattle, WA, USA
Rebecca D. Hodge
6Allen Institute for Brain Science, Seattle, WA, USA
Sten Linnarsson
5Division of Molecular Neurobiology, Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden
Trygve Bakken
6Allen Institute for Brain Science, Seattle, WA, USA
Boaz Levi
6Allen Institute for Brain Science, Seattle, WA, USA
C. Dirk Keene
7Department of Laboratory Medicine and Pathology, University of Washington, Seattle, WA, USA
Jingbo Shang
4Department of Computer Science and Engineering, University of California San Diego, CA, USA
Ed S. Lein
6Allen Institute for Brain Science, Seattle, WA, USA
Allen Wang
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
M. Margarita Behrens
3The Salk Institute for Biological Studies, La Jolla, CA, USA
Joseph R. Ecker
3The Salk Institute for Biological Studies, La Jolla, CA, USA
8Howard Hughes Medical Institute, The Salk Institute for Biological Studies, La Jolla, CA, USA
Bing Ren
1Department of Cellular and Molecular Medicine, University of California, San Diego, San Diego, CA, USA
2Center for Epigenomics, University of California San Diego, School of Medicine, La Jolla, CA, USA.
9Ludwig Institute for Cancer Research, La Jolla, CA, USA
Article usage
Posted November 10, 2022.
A comparative atlas of single-cell chromatin accessibility in the human brain
Yang Eric Li, Sebastian Preissl, Michael Miller, Nicholas D. Johnson, Zihan Wang, Henry Jiao, Chenxu Zhu, Zhaoning Wang, Yang Xie, Olivier Poirion, Colin Kern, Antonio Pinto-Duarte, Wei Tian, Kimberly Siletti, Nora Emerson, Julia Osteen, Jacinta Lucero, Lin Lin, Qian Yang, Quan Zhu, Sarah Espinoza, Anna Marie Yanny, Julie Nyhus, Nick Dee, Tamara Casper, Nadiya Shapovalova, Daniel Hirschstein, Rebecca D. Hodge, Sten Linnarsson, Trygve Bakken, Boaz Levi, C. Dirk Keene, Jingbo Shang, Ed S. Lein, Allen Wang, M. Margarita Behrens, Joseph R. Ecker, Bing Ren
bioRxiv 2022.11.09.515833; doi: https://doi.org/10.1101/2022.11.09.515833
A comparative atlas of single-cell chromatin accessibility in the human brain
Yang Eric Li, Sebastian Preissl, Michael Miller, Nicholas D. Johnson, Zihan Wang, Henry Jiao, Chenxu Zhu, Zhaoning Wang, Yang Xie, Olivier Poirion, Colin Kern, Antonio Pinto-Duarte, Wei Tian, Kimberly Siletti, Nora Emerson, Julia Osteen, Jacinta Lucero, Lin Lin, Qian Yang, Quan Zhu, Sarah Espinoza, Anna Marie Yanny, Julie Nyhus, Nick Dee, Tamara Casper, Nadiya Shapovalova, Daniel Hirschstein, Rebecca D. Hodge, Sten Linnarsson, Trygve Bakken, Boaz Levi, C. Dirk Keene, Jingbo Shang, Ed S. Lein, Allen Wang, M. Margarita Behrens, Joseph R. Ecker, Bing Ren
bioRxiv 2022.11.09.515833; doi: https://doi.org/10.1101/2022.11.09.515833
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