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Transcriptional reprogramming of natural killer cells by vaccinia virus shows both distinct and conserved features with mCMV

Delphine M Depierreux, View ORCID ProfileGeoffrey L Smith, View ORCID ProfileBrian J Ferguson
doi: https://doi.org/10.1101/2022.11.10.516015
Delphine M Depierreux
1Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, UK
2Fred Hutchinson Cancer Centre, Seattle, Washington, USA
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Geoffrey L Smith
1Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, UK
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  • For correspondence: bf234@cam.ac.uk gls37@cam.ac.uk
Brian J Ferguson
1Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge, UK
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  • For correspondence: bf234@cam.ac.uk gls37@cam.ac.uk
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Abstract

Natural killer (NK) cells have an established role in controlling poxvirus infection and there is a growing interest to exploit their capabilities in the context of poxvirus-based oncolytic therapy and vaccination. How NK cells recognise poxvirus-infected cells to become activated remains unclear. To address this knowledge gap, we studied the NK cell response to vaccinia virus (VACV) in vivo, using a systemic infection murine model. We found broad alterations in NK cells transcriptional activity in VACV-infected mice, consistent with both direct target cell recognition and cytokine exposure. There were also alterations in the expression levels of specific NK surface receptors (NKRs), including the Ly49 family and SLAM receptors, as well as upregulation of memory-associated NK markers. Despite the latter observation, adoptive transfer of NK memory populations did not confer protection from re-infection. Comparison with the NK cell response to murine cytomegalovirus (MCMV) infection highlighted common features, but also distinct NK transcriptional programmes initiated by VACV. Finally, there was a clear overlap between the NK transcriptional response in humans vaccinated with an attenuated VACV, modified vaccinia Ankara (MVA), demonstrating conservation between the NK response in these different host species. Overall, this study provides new data about NK cell activation, function, and homeostasis during VACV infection, and may have implication for the design of VACV-based therapeutics.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted November 10, 2022.
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Transcriptional reprogramming of natural killer cells by vaccinia virus shows both distinct and conserved features with mCMV
Delphine M Depierreux, Geoffrey L Smith, Brian J Ferguson
bioRxiv 2022.11.10.516015; doi: https://doi.org/10.1101/2022.11.10.516015
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Transcriptional reprogramming of natural killer cells by vaccinia virus shows both distinct and conserved features with mCMV
Delphine M Depierreux, Geoffrey L Smith, Brian J Ferguson
bioRxiv 2022.11.10.516015; doi: https://doi.org/10.1101/2022.11.10.516015

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