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Deciphering anti-infectious compounds from Peruvian medicinal Cordoncillos extract library through multiplexed assays and chemical profiling

View ORCID ProfilePedro G. Vásquez-Ocmín, View ORCID ProfileSandrine Cojean, View ORCID ProfileVincent Roumy, View ORCID ProfileGuillaume Marti, View ORCID ProfileSébastien Pomel, View ORCID ProfileAlice Gadea, Karine Leblanc, Indira Dennemont, Liliana Ruiz-Vásquez, Hivelli Ricopa Cotrina, Wilfredo Ruiz Mesia, View ORCID ProfileStéphane Bertani, View ORCID ProfileLastenia Ruiz Mesia, View ORCID ProfileAlexandre Maciuk
doi: https://doi.org/10.1101/2022.11.15.516654
Pedro G. Vásquez-Ocmín
1UMR152 PHARMADEV, IRD, UPS, Université de Toulouse, Toulouse, France
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  • ORCID record for Pedro G. Vásquez-Ocmín
  • For correspondence: vasco2224@gmail.com alexandre.maciuk@universite-paris-saclay.fr
Sandrine Cojean
2Université Paris-Saclay, CNRS, BioCIS, 91400, Orsay, France
3CNR du Paludisme, AP-HP, Hôpital Bichat - Claude Bernard, F-75018 Paris, France
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Vincent Roumy
4Joint Research Unit 1158 BioEcoAgro, Univ. Lille, JUNIA, INRAE, Univ. Liège, UPJV, Univ. Artois, ULCO, F-59650, Villeneuve d’Ascq, France
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Guillaume Marti
5Laboratoire de Recherche en Sciences Végétales (UMR 5546), CNRS, Université de Toulouse, Toulouse, France
6MetaboHUB, National Infrastructure of Metabolomics and Fluxomics, Toulouse, France
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Sébastien Pomel
2Université Paris-Saclay, CNRS, BioCIS, 91400, Orsay, France
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Alice Gadea
1UMR152 PHARMADEV, IRD, UPS, Université de Toulouse, Toulouse, France
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Karine Leblanc
2Université Paris-Saclay, CNRS, BioCIS, 91400, Orsay, France
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Indira Dennemont
2Université Paris-Saclay, CNRS, BioCIS, 91400, Orsay, France
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Liliana Ruiz-Vásquez
7Facultad de Farmacia y Bioquímica, Universidad Nacional de la Amazonía Peruana (UNAP), Iquitos 16000, Peru
8Centro de Investigación de Recursos Naturales, Universidad Nacional de la Amazonía Peruana (UNAP), Iquitos 16002, Peru
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Hivelli Ricopa Cotrina
8Centro de Investigación de Recursos Naturales, Universidad Nacional de la Amazonía Peruana (UNAP), Iquitos 16002, Peru
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Wilfredo Ruiz Mesia
9Facultad de Ingeniería Química, Universidad Nacional de la Amazonía Peruana (UNAP), Iquitos 16002, Peru
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Stéphane Bertani
1UMR152 PHARMADEV, IRD, UPS, Université de Toulouse, Toulouse, France
10International Joint Laboratory of Molecular Anthropological Oncology (LOAM), National Cancer Institute, Lima, Perú
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Lastenia Ruiz Mesia
8Centro de Investigación de Recursos Naturales, Universidad Nacional de la Amazonía Peruana (UNAP), Iquitos 16002, Peru
9Facultad de Ingeniería Química, Universidad Nacional de la Amazonía Peruana (UNAP), Iquitos 16002, Peru
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Alexandre Maciuk
2Université Paris-Saclay, CNRS, BioCIS, 91400, Orsay, France
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  • ORCID record for Alexandre Maciuk
  • For correspondence: vasco2224@gmail.com alexandre.maciuk@universite-paris-saclay.fr
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Abstract

High prevalence of parasitic or bacterial infectious diseases in some world areas is due to multiple reasons, including a lack of an appropriate health policy, challenging logistics and poverty. The support to research and development of new medicines to fight infectious diseases is one of the sustainable development goals promoted by World Health Organization (WHO). In this sense, the traditional medicinal knowledge substantiated by ethnopharmacology is a valuable starting point for drug discovery. This work aims at the scientific validation of the traditional use of Piper species (“Cordoncillos”) as firsthand anti-infectious medicines. For this purpose, we adapted a computational statistical model to correlate the LCMS chemical profiles of 54 extracts from 19 Piper species to their corresponding anti-infectious assay results based on 37 microbial or parasites strains. We mainly identified two groups of bioactive compounds (called features as they are considered at the analytical level and are not formally isolated). Group 1 is composed of 11 features being highly correlated to an inhibiting activity on 21 bacteria (principally Gram-positive strains), one fungus (C. albicans), and one parasite (Trypanosoma brucei gambiense). The group 2 is composed of 9 features having a clear selectivity on Leishmania (all strains, both axenic and intramacrophagic). Bioactive features in group 1 were identified principally in the extracts of Piper strigosum and P. xanthostachyum. In group 2, bioactive features were distributed in the extracts of 14 Piper species. This multiplexed approach provided a broad picture of the metabolome as well as a map of compounds putatively associated to bioactivity. To our knowledge, the implementation of this type of metabolomics tools aimed at identifying bioactive compounds has not been used so far.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵⊥ These authors share senior authorship

  • A mistake in the title of the article was corrected.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted November 17, 2022.
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Deciphering anti-infectious compounds from Peruvian medicinal Cordoncillos extract library through multiplexed assays and chemical profiling
Pedro G. Vásquez-Ocmín, Sandrine Cojean, Vincent Roumy, Guillaume Marti, Sébastien Pomel, Alice Gadea, Karine Leblanc, Indira Dennemont, Liliana Ruiz-Vásquez, Hivelli Ricopa Cotrina, Wilfredo Ruiz Mesia, Stéphane Bertani, Lastenia Ruiz Mesia, Alexandre Maciuk
bioRxiv 2022.11.15.516654; doi: https://doi.org/10.1101/2022.11.15.516654
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Deciphering anti-infectious compounds from Peruvian medicinal Cordoncillos extract library through multiplexed assays and chemical profiling
Pedro G. Vásquez-Ocmín, Sandrine Cojean, Vincent Roumy, Guillaume Marti, Sébastien Pomel, Alice Gadea, Karine Leblanc, Indira Dennemont, Liliana Ruiz-Vásquez, Hivelli Ricopa Cotrina, Wilfredo Ruiz Mesia, Stéphane Bertani, Lastenia Ruiz Mesia, Alexandre Maciuk
bioRxiv 2022.11.15.516654; doi: https://doi.org/10.1101/2022.11.15.516654

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