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Structure and dynamics of human perilipin 3 membrane association

View ORCID ProfileYong Mi Choi, Dalila Ajjaji, Kaelin D. Fleming, Peter P. Borbat, Meredith L. Jenkins, Brandon E Moeller, Jack H. Freed, View ORCID ProfileJohn E. Burke, Abdou Rachid Thiam, View ORCID ProfileMichael V. Airola
doi: https://doi.org/10.1101/2022.11.17.516819
Yong Mi Choi
1Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook NY 11794, USA
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  • ORCID record for Yong Mi Choi
Dalila Ajjaji
2Laboratoire de Physique de l’École normale supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université Paris Cité, F-75005 Paris, France
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Kaelin D. Fleming
3Department of Biochemistry and Microbiology, University of Victoria, Victoria BC V8N 1A1, Canada
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Peter P. Borbat
5National Biomedical Center for Advanced Electron Spin Resonance Technology, Cornell University, Ithaca, United States
6Department of Chemistry and Chemical Biology, Cornell University, Ithaca, United States
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Meredith L. Jenkins
3Department of Biochemistry and Microbiology, University of Victoria, Victoria BC V8N 1A1, Canada
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Brandon E Moeller
3Department of Biochemistry and Microbiology, University of Victoria, Victoria BC V8N 1A1, Canada
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Jack H. Freed
5National Biomedical Center for Advanced Electron Spin Resonance Technology, Cornell University, Ithaca, United States
6Department of Chemistry and Chemical Biology, Cornell University, Ithaca, United States
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John E. Burke
3Department of Biochemistry and Microbiology, University of Victoria, Victoria BC V8N 1A1, Canada
4Department of Biochemistry and Molecular Biology, The University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada
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  • For correspondence: michael.airola@stonybrook.edu thiam@ens.fr jeburke@uvic.ca
Abdou Rachid Thiam
2Laboratoire de Physique de l’École normale supérieure, ENS, Université PSL, CNRS, Sorbonne Université, Université Paris Cité, F-75005 Paris, France
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  • For correspondence: michael.airola@stonybrook.edu thiam@ens.fr jeburke@uvic.ca
Michael V. Airola
1Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook NY 11794, USA
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  • ORCID record for Michael V. Airola
  • For correspondence: michael.airola@stonybrook.edu thiam@ens.fr jeburke@uvic.ca
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ABSTRACT

Lipid droplets (LDs) are dynamic organelles that contain an oil core mainly composed of triglycerides (TAG) that is surrounded by a phospholipid monolayer and LD-associated proteins called perilipins (PLINs). During LD biogenesis, perilipin 3 (PLIN3) is recruited to nascent LDs as they emerge from the endoplasmic reticulum. Here, we analyzed how lipid composition affects PLIN3 recruitment to membrane bilayers and LDs, and the structural changes that occur upon membrane binding. We found the TAG precursors phosphatidic acid and diacylglycerol (DAG) recruit PLIN3 to membrane bilayers and define an expanded PAT domain that preferentially binds DAG enriched membranes. Membrane binding induces a disorder/order transition of alpha helices within the PAT domain and 11-mer repeats, with intramolecular distance measurements consistent with the expanded PAT domain adopting a triangular tertiary structure. In cells, PLIN3 is recruited to DAG enriched ER membranes, and this requires both the PAT domain and 11-mer repeats. This provides molecular details of PLIN3 recruitment to nascent LDs and identifies a function of the PAT domain of PLIN3 in DAG binding.

Competing Interest Statement

JEB reports personal fees from Scorpion Therapeutics and Olema Oncology; and research grants from Novartis.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted November 17, 2022.
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Structure and dynamics of human perilipin 3 membrane association
Yong Mi Choi, Dalila Ajjaji, Kaelin D. Fleming, Peter P. Borbat, Meredith L. Jenkins, Brandon E Moeller, Jack H. Freed, John E. Burke, Abdou Rachid Thiam, Michael V. Airola
bioRxiv 2022.11.17.516819; doi: https://doi.org/10.1101/2022.11.17.516819
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Structure and dynamics of human perilipin 3 membrane association
Yong Mi Choi, Dalila Ajjaji, Kaelin D. Fleming, Peter P. Borbat, Meredith L. Jenkins, Brandon E Moeller, Jack H. Freed, John E. Burke, Abdou Rachid Thiam, Michael V. Airola
bioRxiv 2022.11.17.516819; doi: https://doi.org/10.1101/2022.11.17.516819

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