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Nirmatrelvir treatment blunts the development of antiviral adaptive immune responses in SARS-CoV-2 infected mice

Valeria Fumagalli, Pietro Di Lucia, Micol Ravà, Davide Marotta, Elisa Bono, Stefano Grassi, Lorena Donnici, Rolando Cannalire, Irina Stefanelli, Anastasia Ferraro, Francesca Esposito, Elena Pariani, Donato Inverso, Camilla Montesano, Serena Delbue, Enzo Tramontano, Raffaele De Francesco, Vincenzo Summa, Luca G. Guidotti, View ORCID ProfileMatteo Iannacone
doi: https://doi.org/10.1101/2022.11.22.517465
Valeria Fumagalli
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
2Vita-Salute San Raffaele University, 20132 Milan, Italy
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Pietro Di Lucia
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
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Micol Ravà
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
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Davide Marotta
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
2Vita-Salute San Raffaele University, 20132 Milan, Italy
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Elisa Bono
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
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Stefano Grassi
3Pathology Unit, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
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Lorena Donnici
4INGM - Istituto Nazionale di Genetica Molecolare “Romeo ed Erica Invernizzi”, 20122 Milan, Italy
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Rolando Cannalire
5Department of Pharmacy, School of Medicine and Surgery, University of Naples Federico II, 80131 Naples, Italy
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Irina Stefanelli
5Department of Pharmacy, School of Medicine and Surgery, University of Naples Federico II, 80131 Naples, Italy
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Anastasia Ferraro
5Department of Pharmacy, School of Medicine and Surgery, University of Naples Federico II, 80131 Naples, Italy
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Francesca Esposito
6Dipartimento di Scienze della Vita e dell’Ambiente, Cittadella Universitaria di Monserrato, 09042 Monserrato, Cagliari, Italy
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Elena Pariani
7Department of Biomedical Sciences for Health, University of Milan, 20133 Milan, Italy
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Donato Inverso
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
2Vita-Salute San Raffaele University, 20132 Milan, Italy
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Camilla Montesano
8Department of Chemistry, La Sapienza University, 00185 Rome, Italy
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Serena Delbue
9Department of Biomedical, Surgical and Dental Sciences, University of Milan, 20122 Milan, Italy
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Enzo Tramontano
6Dipartimento di Scienze della Vita e dell’Ambiente, Cittadella Universitaria di Monserrato, 09042 Monserrato, Cagliari, Italy
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Raffaele De Francesco
4INGM - Istituto Nazionale di Genetica Molecolare “Romeo ed Erica Invernizzi”, 20122 Milan, Italy
10Department of Pharmacological and Biomolecular Sciences, University of Milan, 20133 Milan, Italy
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Vincenzo Summa
5Department of Pharmacy, School of Medicine and Surgery, University of Naples Federico II, 80131 Naples, Italy
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Luca G. Guidotti
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
2Vita-Salute San Raffaele University, 20132 Milan, Italy
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  • For correspondence: iannacone.matteo@hsr.it guidotti.luca@hsr.it
Matteo Iannacone
1Division of Immunology, Transplantation, and Infectious Diseases, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
2Vita-Salute San Raffaele University, 20132 Milan, Italy
11Experimental Imaging Centre, IRCCS San Raffaele Scientific Institute, 20132 Milan, Italy
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  • ORCID record for Matteo Iannacone
  • For correspondence: iannacone.matteo@hsr.it guidotti.luca@hsr.it
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Abstract

Alongside vaccines, antiviral drugs are becoming an integral part of our response to the SARS-CoV-2 pandemic. Nirmatrelvir – an orally available inhibitor of the 3-chymotrypsin-like cysteine protease – has been shown to reduce the risk of progression to severe COVID-19. However, the impact of nirmatrelvir treatment on the development of SARS-CoV-2-specific adaptive immune responses is unknown. Here, by using a mouse model of SARS-CoV-2 infection, we show that nirmatrelvir administration early after infection blunts the development of SARS-CoV-2-specific antibody and T cell responses. Accordingly, upon secondary challenge, nirmatrelvir-treated mice recruited significantly fewer memory T and B cells to the infected lungs and to mediastinal lymph nodes, respectively. Together, the data highlight a potential negative impact of nirmatrelvir treatment with important implications for clinical management and might help explain the virological and/or symptomatic relapse after treatment completion reported in some individuals.

Competing Interest Statement

M.I. participates in advisory boards/consultancies for Gilead Sciences, Roche, Third Rock Ventures, Antios Therapeutics, Asher Bio, ENYO Pharma, Amgen, Allovir. L.G.G is a member of the board of directors at Genenta Science and participates in advisory boards/consultancies for Antios Therapeutics, Chroma Medicine, Ananda Immunotherapies and Gilead Sciences. R.D.F is a consultant for Moderna and a member of the board of directors of T-One Therapeutics.

Footnotes

  • Figure S6 revised

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Nirmatrelvir treatment blunts the development of antiviral adaptive immune responses in SARS-CoV-2 infected mice
Valeria Fumagalli, Pietro Di Lucia, Micol Ravà, Davide Marotta, Elisa Bono, Stefano Grassi, Lorena Donnici, Rolando Cannalire, Irina Stefanelli, Anastasia Ferraro, Francesca Esposito, Elena Pariani, Donato Inverso, Camilla Montesano, Serena Delbue, Enzo Tramontano, Raffaele De Francesco, Vincenzo Summa, Luca G. Guidotti, Matteo Iannacone
bioRxiv 2022.11.22.517465; doi: https://doi.org/10.1101/2022.11.22.517465
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Nirmatrelvir treatment blunts the development of antiviral adaptive immune responses in SARS-CoV-2 infected mice
Valeria Fumagalli, Pietro Di Lucia, Micol Ravà, Davide Marotta, Elisa Bono, Stefano Grassi, Lorena Donnici, Rolando Cannalire, Irina Stefanelli, Anastasia Ferraro, Francesca Esposito, Elena Pariani, Donato Inverso, Camilla Montesano, Serena Delbue, Enzo Tramontano, Raffaele De Francesco, Vincenzo Summa, Luca G. Guidotti, Matteo Iannacone
bioRxiv 2022.11.22.517465; doi: https://doi.org/10.1101/2022.11.22.517465

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