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Direct observation of the evolution of cell-type specific microRNA expression signatures supports the hematopoietic origin model of endothelial cells

Ana E. Jenike, Katharine M. Jenike, Kevin J. Peterson, View ORCID ProfileBastian Fromm, View ORCID ProfileMarc K. Halushka
doi: https://doi.org/10.1101/2022.11.23.517662
Ana E. Jenike
1Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, 21205 USA
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Katharine M. Jenike
2Department of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, 21205 USA
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Kevin J. Peterson
3Department of Biological Sciences, Dartmouth College, Hanover NH, USA
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Bastian Fromm
4The Arctic University Museum of Norway, UiT-The Arctic University of Norway, 9006 Tromsø, Norway
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  • ORCID record for Bastian Fromm
  • For correspondence: mhalush1@jhmi.edu bastian.fromm@uit.no
Marc K. Halushka
1Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, 21205 USA
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  • ORCID record for Marc K. Halushka
  • For correspondence: mhalush1@jhmi.edu bastian.fromm@uit.no
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Abstract

The evolution of specialized cell-types is a long-standing interest of biologists, but given the deep time-scales very difficult to reconstruct or observe. microRNAs have been linked to the evolution of cellular complexity and may inform on specialization. The endothelium is a vertebrate specific specialization of the circulatory system that enabled a critical new level of vasoregulation. The evolutionary origin of these endothelial cells is unclear. We hypothesized that Mir-126, an endothelial cell-specific microRNA may be informative.

We here reconstruct the evolutionary history of Mir-126. Mir-126 likely appeared in the last common ancestor of vertebrates and tunicates, a species without an endothelium, within an intron of the evolutionary much older EGF Like Domain Multiple (Egfl) locus. Mir-126 has a complex evolutionary history due to duplications and losses of both the host gene and the microRNA. Taking advantage of the strong evolutionary conservation of the microRNA among Olfactores, and using RNA in situ hybridization (RISH), we localized Mir-126 in the tunicate Ciona robusta. We found exclusive expression of the mature Mir-126 in granular amebocytes, supporting a long-proposed scenario that endothelial cells arose from hemoblasts, a type of proto-endothelial amoebocyte found throughout invertebrates.

This observed change of expression of Mir-126 from proto-endothelial amoebocytes in the tunicate to endothelial cells in vertebrates is the first direct observation of the evolution of a cell-type in relation to microRNA expression indicating that microRNAs can be a prerequisite of cell-type evolution.

Research Highlights

  • direct observation of cell-type evolution

  • high conservation of sequence enables for simple RISH experiment of expression

  • Mir-126 follows the evolution of hematopoetic cells to endothelial cells

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 24, 2022.
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Direct observation of the evolution of cell-type specific microRNA expression signatures supports the hematopoietic origin model of endothelial cells
Ana E. Jenike, Katharine M. Jenike, Kevin J. Peterson, Bastian Fromm, Marc K. Halushka
bioRxiv 2022.11.23.517662; doi: https://doi.org/10.1101/2022.11.23.517662
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Direct observation of the evolution of cell-type specific microRNA expression signatures supports the hematopoietic origin model of endothelial cells
Ana E. Jenike, Katharine M. Jenike, Kevin J. Peterson, Bastian Fromm, Marc K. Halushka
bioRxiv 2022.11.23.517662; doi: https://doi.org/10.1101/2022.11.23.517662

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