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Dynamics of methane cycling microbiome during methane flux hot moments from riparian buffer systems

View ORCID ProfileDasiel Obregon, View ORCID ProfileTolulope Mafa-Attoye, Megan Baskerville, View ORCID ProfileEduardo Mitter, View ORCID ProfileLeandro Fonseca de Souza, View ORCID ProfileMaren Oelbermann, View ORCID ProfileNaresh Thevathasan, View ORCID ProfileSiu Mui Tsai, View ORCID ProfileKari Dunfield
doi: https://doi.org/10.1101/2022.11.24.517857
Dasiel Obregon
1School of Environmental Science, University of Guelph, 50 Stone Rd E, Guelph, ON, N1H 2W1, Canada
2Center for Nuclear Energy in Agriculture, University of São Paulo, Av. Centenário, 303 - São Dimas, Piracicaba, SP, 13400-970, Brazil
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Tolulope Mafa-Attoye
1School of Environmental Science, University of Guelph, 50 Stone Rd E, Guelph, ON, N1H 2W1, Canada
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Megan Baskerville
3Environment and Climate Change Canada, 351, Boul. Saint-Joseph, Gatineau, Quebec, QC, K1A 0H3, Canada
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Eduardo Mitter
1School of Environmental Science, University of Guelph, 50 Stone Rd E, Guelph, ON, N1H 2W1, Canada
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Leandro Fonseca de Souza
2Center for Nuclear Energy in Agriculture, University of São Paulo, Av. Centenário, 303 - São Dimas, Piracicaba, SP, 13400-970, Brazil
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Maren Oelbermann
4School of Environment, Resources, and Sustainability, University of Waterloo, 200 University Avenue West, Waterloo, ON, N2L 3G1 Canada
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Naresh Thevathasan
1School of Environmental Science, University of Guelph, 50 Stone Rd E, Guelph, ON, N1H 2W1, Canada
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Siu Mui Tsai
2Center for Nuclear Energy in Agriculture, University of São Paulo, Av. Centenário, 303 - São Dimas, Piracicaba, SP, 13400-970, Brazil
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Kari Dunfield
1School of Environmental Science, University of Guelph, 50 Stone Rd E, Guelph, ON, N1H 2W1, Canada
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  • For correspondence: dunfield@uoguelph.ca
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Abstract

Riparian buffer systems (RBS) are a common agroforestry practice that consists of keeping a forested boundary adjacent to water bodies in agricultural landscapes, thus helping to protect aquatic ecosystems from adverse impacts. Nevertheless, despite the multiple benefits they provide, RBSs can be hotspots of methane emissions since abundant organic carbon and high-water tables are often found in these soils. In southern Ontario, Canada, the rehabilitation of Washington Creek’s streambank occurred in 1985. In a recent study, methane (CH4) fluxes were measured biweekly for two years (2017-2018) in four different vegetative riparian areas alongside Washington creek: a rehabilitated tree buffer (RH), a grassed buffer (GRB), an undisturbed deciduous forest (UNF), an undisturbed coniferous forest (CF), and an adjacent agricultural field (AGR) for comparison. Based on methane fluxes in 2018 and hot moments identified, we selected two dates from summer (July 04 and August 15) and use soil sampling from those days to assess the CH4 cycling microbial communities in these RBS. We used qPCR and high-throughput sequencing from both DNA and cDNA to measure the diversity and activity of the methanogen and methanotroph communities. Methanogens were abundant in all riparian soils, including the archaeal genera Methanosaeta, Methanosarcina, Methanomassiliicoccus Methanoreggula, but they were mostly active in UNF soils. Among methanotrophs, Methylocystis was the most abundant taxon in all the riparian sites, except for AGR soils where the methanotrophs community mostly comprised members of rice paddy clusters (RPCs and RPC-1) and upland soil clusters (TUSC and USCα). In summary, these results indicate that differences in CH4 fluxes between RBS at Washington creek are influenced by differences in the presence and activity of methanogens, which were higher in the deciduous forest (UNF) soils during hot moments CH4 flux, likely due to high water content in that soils.

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Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted November 24, 2022.
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Dynamics of methane cycling microbiome during methane flux hot moments from riparian buffer systems
Dasiel Obregon, Tolulope Mafa-Attoye, Megan Baskerville, Eduardo Mitter, Leandro Fonseca de Souza, Maren Oelbermann, Naresh Thevathasan, Siu Mui Tsai, Kari Dunfield
bioRxiv 2022.11.24.517857; doi: https://doi.org/10.1101/2022.11.24.517857
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Dynamics of methane cycling microbiome during methane flux hot moments from riparian buffer systems
Dasiel Obregon, Tolulope Mafa-Attoye, Megan Baskerville, Eduardo Mitter, Leandro Fonseca de Souza, Maren Oelbermann, Naresh Thevathasan, Siu Mui Tsai, Kari Dunfield
bioRxiv 2022.11.24.517857; doi: https://doi.org/10.1101/2022.11.24.517857

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