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Rapid Adaptation of Cellular Metabolic Rate to the microRNA Complements of Mammals

View ORCID ProfileBastian Fromm, View ORCID ProfileThomas Sorger
doi: https://doi.org/10.1101/2022.11.24.517858
Bastian Fromm
1The Arctic University Museum of Norway, UiT- The Arctic University of Norway, 9037 Tromsø, Norway
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Thomas Sorger
2Department of Biology, Roger Williams University, Bristol, Rhode Island 02809, USA
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  • For correspondence: tsorger@rwu.edu
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ABSTRACT

Terrestrial mammals range over six orders of magnitude in size, while average cellular, or specific metabolic rate (sMR) varies only ∼5-fold, constrained by the strict matching of protein synthesis to cell size. Protein synthesis, the single most costly metabolic activity, accounts for 20% of ATP turnover, and the speed of translation can be increased only at the expense of increased energy dissipation due to misreading errors and stochastic translation noise. We hypothesized that global microRNA activity evolved under the same constraints as sMR and would therefore exhibit a similar pattern of variation. This expectation was met by the number of microRNA families: based on the manually curated microRNA gene database MirGeneDB, the acquisition of microRNA families (mirFam) accelerated two-fold in late-branching mammals with body temperatures (Tb) > 36°C, relative to early-branching mammals (Tb < 36°C), independent of phylogenetic distance. When sMR is fit to mirFam by maximum likelihood, the variation is homoscedastic, allowing us to compare models for the evolution of sMR in relation to mirFam. With mirFam as the predictor, an Ornstein-Uhlenbeck (OU) process of stabilizing selection accounted better for the biphasic evolution of sMR than did the corresponding Brownian motion model, and was optimized when sMR was scaled to M0.75. OU simulations with an adaptive shift at the divergence of Boreoeutheria predicted 95% of the variation in sMR. We infer that the advent of placentation led to the emergence of an adaptive optimum characterized by higher body temperatures, faster MRs, and heightened global microRNA activity.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 25, 2022.
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Rapid Adaptation of Cellular Metabolic Rate to the microRNA Complements of Mammals
Bastian Fromm, Thomas Sorger
bioRxiv 2022.11.24.517858; doi: https://doi.org/10.1101/2022.11.24.517858
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Rapid Adaptation of Cellular Metabolic Rate to the microRNA Complements of Mammals
Bastian Fromm, Thomas Sorger
bioRxiv 2022.11.24.517858; doi: https://doi.org/10.1101/2022.11.24.517858

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