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Reverse genetics identifies proteins regulating lipid droplet biogenesis via amphipathic helices

View ORCID ProfileMd. Abdulla Al Mamun, View ORCID ProfileM. Abu Reza, Md Sayeedul Islam
doi: https://doi.org/10.1101/2022.11.24.517872
Md. Abdulla Al Mamun
1Department of Biotechnology, The University of Tokyo, Tokyo, Japan
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  • For correspondence: abmamun@g.ecc.u-tokyo.ac.jp
M. Abu Reza
2Department of Genetic Engineering and Biotechnology, University of Rajshahi, Rajshahi, Bangladesh
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Md Sayeedul Islam
3Department of Biological Sciences, Osaka University, Osaka, Japan
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Abstract

Lipid droplets (LDs) are storage organelles for neutral lipids. Our knowledge about fungal LD biogenesis is limited to budding yeast. Moreover, regulation of LD in multinucleated filamentous fungi with considerable metabolic activity is unknown. Here, 19 LD-associated proteins were identified in Aspergillus oryzae using colocalization screening of a previously established Enhanced green fluorescent protein (EGFP) fusion proteins library. Following a functional screening, 12 candidates have been identified as lipid droplet regulating (LDR) proteins, the loss of which resulted in aberrant LD biogenesis. LDR proteins bind to LD via the insertion of the putative amphipathic helices (AHs) that were investigated using AH-disruptive mutations and subsequent imaging. Further analysis revealed that LdrA with Opi1 domain is essential for cytoplasmic and nuclear LD biogenesis via a novel AH. Phylogenetic analysis demonstrated the pattern of their evolution, which was predominantly based-on gene duplication. Our study provides substantial molecular insights into LD biogenesis and creates a breakthrough in using reverse genetics for identifying LD-regulating proteins.

Competing Interest Statement

The authors have declared no competing interest.

  • Abbreviations

    LD
    lipid droplets;
    LDR
    lipid droplet regulating;
    AH
    amphipathic helices;
    NLS
    nuclear localizing signal;
    HRP
    horseradish peroxidase;
  • Copyright 
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    Posted November 25, 2022.
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    Reverse genetics identifies proteins regulating lipid droplet biogenesis via amphipathic helices
    Md. Abdulla Al Mamun, M. Abu Reza, Md Sayeedul Islam
    bioRxiv 2022.11.24.517872; doi: https://doi.org/10.1101/2022.11.24.517872
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    Reverse genetics identifies proteins regulating lipid droplet biogenesis via amphipathic helices
    Md. Abdulla Al Mamun, M. Abu Reza, Md Sayeedul Islam
    bioRxiv 2022.11.24.517872; doi: https://doi.org/10.1101/2022.11.24.517872

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