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Fluorescein-based sensors to purify human α-cells for functional and transcriptomic analyses

Sevim Kahraman, Kimitaka Shibue, Dario F. De Jesus, Jiang Hu, Debasish Manna, Bridget K. Wagner, Amit Choudhary, View ORCID ProfileRohit N. Kulkarni
doi: https://doi.org/10.1101/2022.11.27.518097
Sevim Kahraman
1Islet Cell and Regenerative Biology, Joslin Diabetes Center, Boston, MA, USA
2Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA, USA
3Harvard Stem Cell Institute, Harvard Medical School, Boston, MA, USA
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Kimitaka Shibue
1Islet Cell and Regenerative Biology, Joslin Diabetes Center, Boston, MA, USA
2Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA, USA
3Harvard Stem Cell Institute, Harvard Medical School, Boston, MA, USA
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Dario F. De Jesus
1Islet Cell and Regenerative Biology, Joslin Diabetes Center, Boston, MA, USA
2Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA, USA
3Harvard Stem Cell Institute, Harvard Medical School, Boston, MA, USA
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Jiang Hu
1Islet Cell and Regenerative Biology, Joslin Diabetes Center, Boston, MA, USA
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Debasish Manna
4Chemical Biology and Therapeutics Science Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA
5Divisions of Renal Medicine and Engineering, Brigham and Women’s Hospital, Boston, MA, USA
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Bridget K. Wagner
4Chemical Biology and Therapeutics Science Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Amit Choudhary
4Chemical Biology and Therapeutics Science Program, Broad Institute of MIT and Harvard, Cambridge, MA, USA
5Divisions of Renal Medicine and Engineering, Brigham and Women’s Hospital, Boston, MA, USA
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Rohit N. Kulkarni
1Islet Cell and Regenerative Biology, Joslin Diabetes Center, Boston, MA, USA
2Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA, USA
3Harvard Stem Cell Institute, Harvard Medical School, Boston, MA, USA
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  • ORCID record for Rohit N. Kulkarni
  • For correspondence: Rohit.Kulkarni@joslin.harvard.edu
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Abstract

Pancreatic α-cells secrete glucagon, an insulin counter-regulatory peptide hormone critical for the maintenance of glucose homeostasis. Investigation of the function of human α-cells remains a challenge due to the lack of cost-effective purification methods to isolate high-quality α-cells from islets. Here, we use the reaction-based probe diacetylated Zinpyr1 (DA-ZP1) to introduce a novel and simple method for enriching live α-cells from dissociated human islet cells with > 97% purity. The α-cells, confirmed by sorting and immunostaining for glucagon, were cultured up to 10 days to form α-pseudoislets. The α-pseudoislets could be maintained in culture without significant loss of viability, and responded to glucose challenge by secreting appropriate levels of glucagon. RNA-sequencing analyses (RNA-seq) revealed that expression levels of key α-cell identity genes were sustained in culture while some of the genes such as DLK1, GSN, SMIM24 were altered in α-pseudoislets in a time-dependent manner. In conclusion, we report a method to sort human primary α-cells with high purity that can be used for downstream analyses such as functional and transcriptional studies.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted November 28, 2022.
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Fluorescein-based sensors to purify human α-cells for functional and transcriptomic analyses
Sevim Kahraman, Kimitaka Shibue, Dario F. De Jesus, Jiang Hu, Debasish Manna, Bridget K. Wagner, Amit Choudhary, Rohit N. Kulkarni
bioRxiv 2022.11.27.518097; doi: https://doi.org/10.1101/2022.11.27.518097
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Fluorescein-based sensors to purify human α-cells for functional and transcriptomic analyses
Sevim Kahraman, Kimitaka Shibue, Dario F. De Jesus, Jiang Hu, Debasish Manna, Bridget K. Wagner, Amit Choudhary, Rohit N. Kulkarni
bioRxiv 2022.11.27.518097; doi: https://doi.org/10.1101/2022.11.27.518097

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