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Inorganic polyphosphate abets silencing of a sub-telomeric gene cluster in fission yeast

View ORCID ProfileAna M. Sanchez, View ORCID ProfileAngad Garg, View ORCID ProfileBeate Schwer, Stewart Shuman
doi: https://doi.org/10.1101/2022.11.28.517416
Ana M. Sanchez
1Molecular Biology Program, Sloan-Kettering Institute, New York, NY 10065
2Gerstner Sloan Kettering Graduate School of Biomedical Sciences, New York, NY 10065
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  • For correspondence: sancheA6@mskcc.org
Angad Garg
1Molecular Biology Program, Sloan-Kettering Institute, New York, NY 10065
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Beate Schwer
3Dept. of Microbiology and Immunology, Weill Cornell Medical College, New York, NY 10065
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Stewart Shuman
1Molecular Biology Program, Sloan-Kettering Institute, New York, NY 10065
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ABSTRACT

Inorganic polyphosphate (PolyP) is a ubiquitous polymer that plays sundry roles in cell and organismal physiology. Whereas there is evidence for polyphosphate in the cell nucleus, it is unclear whether and how physiological levels of PolyP impact transcriptional regulation in eukarya. To address this issue, we performed transcriptional profiling of fission yeast vtc4Δ cells, which lack the catalytic subunit of the Vtc4/Vtc2 polyphosphate polymerase complex and thus have no detectable intracellular PolyP. Deleting Vtc4 elicited the de-repression of four protein-coding genes – SPAC186.04c, gdt1/SPAC186.05, SPAC186.06, and SPAC750.01 – located within a sub-telomeric region of the right arm of chromosome I that is known to be transcriptionally silenced by the TORC2 complex. These sub-telomeric genes were equally de-repressed in vtc2Δ cells and in cells expressing polymerase-dead Vtc4, signifying that PolyP synthesis is necessary to abet TORC2-dependent locus-specific gene silencing.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted November 29, 2022.
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Inorganic polyphosphate abets silencing of a sub-telomeric gene cluster in fission yeast
Ana M. Sanchez, Angad Garg, Beate Schwer, Stewart Shuman
bioRxiv 2022.11.28.517416; doi: https://doi.org/10.1101/2022.11.28.517416
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Inorganic polyphosphate abets silencing of a sub-telomeric gene cluster in fission yeast
Ana M. Sanchez, Angad Garg, Beate Schwer, Stewart Shuman
bioRxiv 2022.11.28.517416; doi: https://doi.org/10.1101/2022.11.28.517416

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