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A non-canonical sensing pathway mediates Plasmodium adaptation to AA deficiency

View ORCID ProfileInês M. Marreiros, Sofia Marques, Ana Parreira, Vincent Mastrodomenico, Bryan C. Mounce, Chantal T. Harris, View ORCID ProfileBjörn F. Kafsack, View ORCID ProfileOliver Billker, Vanessa Zuzarte-Luís, View ORCID ProfileMaria M. Mota
doi: https://doi.org/10.1101/2022.12.01.518651
Inês M. Marreiros
1Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal
2Instituto de Ciências Biomédicas Abel Salazar (ICBAS), Universidade do Porto, Porto, Portugal
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Sofia Marques
1Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal
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Ana Parreira
1Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal
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Vincent Mastrodomenico
3Department of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois 60153, United States
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Bryan C. Mounce
3Department of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois 60153, United States
4Infectious Disease and Immunology Research Institute, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois 60153, United States
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Chantal T. Harris
5Department of Microbiology and Immunology, Weill Cornell Medical College, New York, NY, USA
6Immunology & Microbial Pathogenesis Graduate Program, Weill Cornell Medicine, New York, USA
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Björn F. Kafsack
5Department of Microbiology and Immunology, Weill Cornell Medical College, New York, NY, USA
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Oliver Billker
7Molecular Infection Medicine Sweden, Molecular Biology Department, Umeå University, Umeå S-90187, Sweden
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Vanessa Zuzarte-Luís
1Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal
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Maria M. Mota
1Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal
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  • For correspondence: mmota@medicina.ulisboa.pt
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Abstract

Eukaryotes have canonical pathways for responding to amino acid (AA) availability. Under AA-limiting conditions, the TOR complex is repressed, whereas the sensor kinase GCN2 is activated. While these pathways have been highly conserved throughout evolution, malaria parasites are a rare exception. Despite auxotrophic for most AA, Plasmodium does not have either a TOR complex nor the GCN2-downstream transcription factors. While Ile starvation has been shown to trigger eIF2α phosphorylation and a hibernatory-like response, the overall mechanisms mediating detection and response to AA fluctuation in the absence of such pathways has remained elusive. Here we show that Plasmodium parasites rely on an efficient sensing pathway to respond to AA fluctuations. A phenotypic screen of kinase knockout mutant parasites identified nek4, eIK1 and eIK2 – the last two clustering with the eukaryotic eIF2α kinases - as critical for Plasmodium to sense and respond to distinct AA-limiting conditions. Such AA-sensing pathway is temporally regulated by these kinases at distinct life cycle stages and allows parasites to actively fine-tune replication and development in response to AA availability. Collectively, our data identify a previously unknown set of heterogeneous responses to AA depletion, mediated by a complex mechanism that is critical for modulating parasite cell cycle and survival.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Conflict of interest, The authors declare no competing interests.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted December 05, 2022.
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A non-canonical sensing pathway mediates Plasmodium adaptation to AA deficiency
Inês M. Marreiros, Sofia Marques, Ana Parreira, Vincent Mastrodomenico, Bryan C. Mounce, Chantal T. Harris, Björn F. Kafsack, Oliver Billker, Vanessa Zuzarte-Luís, Maria M. Mota
bioRxiv 2022.12.01.518651; doi: https://doi.org/10.1101/2022.12.01.518651
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A non-canonical sensing pathway mediates Plasmodium adaptation to AA deficiency
Inês M. Marreiros, Sofia Marques, Ana Parreira, Vincent Mastrodomenico, Bryan C. Mounce, Chantal T. Harris, Björn F. Kafsack, Oliver Billker, Vanessa Zuzarte-Luís, Maria M. Mota
bioRxiv 2022.12.01.518651; doi: https://doi.org/10.1101/2022.12.01.518651

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