Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing for personalized oncology

Arthur Dondi; Ulrike Lischetti; Francis Jacob; Franziska Singer; Nico Borgsmüller; Tumor Profiler Consortium; Viola Heinzelmann-Schwarz; Christian Beisel; Niko Beerenwinkel

doi:10.1101/2022.12.12.520051

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Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing for personalized oncology

View ORCID ProfileArthur Dondi, View ORCID ProfileUlrike Lischetti, View ORCID ProfileFrancis Jacob, View ORCID ProfileFranziska Singer, View ORCID ProfileNico Borgsmüller, Tumor Profiler Consortium, View ORCID ProfileViola Heinzelmann-Schwarz, View ORCID ProfileChristian Beisel, View ORCID ProfileNiko Beerenwinkel

doi: https://doi.org/10.1101/2022.12.12.520051

Arthur Dondi

1ETH Zurich, Department of Biosystems Science and Engineering, Mattenstrasse 26, 4058 Basel, Switzerland

2SIB Swiss Institute of Bioinformatics, Mattenstrasse 26, 4058 Basel, Switzerland

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Ulrike Lischetti

3University Hospital Basel and University of Basel, Ovarian Cancer Research, Department of Biomedicine, Hebelstrasse 20, 4031 Basel, Switzerland

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ORCID record for Ulrike Lischetti
For correspondence: niko.beerenwinkel@bsse.ethz.ch

Francis Jacob

3University Hospital Basel and University of Basel, Ovarian Cancer Research, Department of Biomedicine, Hebelstrasse 20, 4031 Basel, Switzerland

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ORCID record for Francis Jacob

Franziska Singer

2SIB Swiss Institute of Bioinformatics, Mattenstrasse 26, 4058 Basel, Switzerland

4ETH Zurich, NEXUS Personalized Health Technologies, Wagistrasse 18, 8952 Schlieren, Switzerland

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ORCID record for Franziska Singer

Nico Borgsmüller

1ETH Zurich, Department of Biosystems Science and Engineering, Mattenstrasse 26, 4058 Basel, Switzerland

2SIB Swiss Institute of Bioinformatics, Mattenstrasse 26, 4058 Basel, Switzerland

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Viola Heinzelmann-Schwarz

3University Hospital Basel and University of Basel, Ovarian Cancer Research, Department of Biomedicine, Hebelstrasse 20, 4031 Basel, Switzerland

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ORCID record for Viola Heinzelmann-Schwarz

Christian Beisel

1ETH Zurich, Department of Biosystems Science and Engineering, Mattenstrasse 26, 4058 Basel, Switzerland

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ORCID record for Christian Beisel
For correspondence: niko.beerenwinkel@bsse.ethz.ch

Niko Beerenwinkel

1ETH Zurich, Department of Biosystems Science and Engineering, Mattenstrasse 26, 4058 Basel, Switzerland

2SIB Swiss Institute of Bioinformatics, Mattenstrasse 26, 4058 Basel, Switzerland

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ORCID record for Niko Beerenwinkel
For correspondence: niko.beerenwinkel@bsse.ethz.ch

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Posted December 15, 2022.

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Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing for personalized oncology

Arthur Dondi, Ulrike Lischetti, Francis Jacob, Franziska Singer, Nico Borgsmüller, Tumor Profiler Consortium, Viola Heinzelmann-Schwarz, Christian Beisel, Niko Beerenwinkel

bioRxiv 2022.12.12.520051; doi: https://doi.org/10.1101/2022.12.12.520051

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Detection of isoforms and genomic alterations by high-throughput full-length single-cell RNA sequencing for personalized oncology

Arthur Dondi, Ulrike Lischetti, Francis Jacob, Franziska Singer, Nico Borgsmüller, Tumor Profiler Consortium, Viola Heinzelmann-Schwarz, Christian Beisel, Niko Beerenwinkel

bioRxiv 2022.12.12.520051; doi: https://doi.org/10.1101/2022.12.12.520051

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