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The Field-Dependent Nature of PageRank Values in Citation Networks

View ORCID ProfileBenjamin J. Heil, View ORCID ProfileCasey S. Greene
doi: https://doi.org/10.1101/2023.01.05.522943
Benjamin J. Heil
1Genomics and Computational Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania
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Casey S. Greene
2Department of Pharmacology, University of Colorado School of Medicine; Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine
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  • For correspondence: casey.s.greene@cuanschutz.edu
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Abstract

The value of scientific research can be easier to assess at the collective level than at the level of individual contributions. Several journal-level and article-level metrics aim to measure the importance of journals or individual manuscripts. However, many are citation-based and citation practices vary between fields. To account for these differences, scientists have devised normalization schemes to make metrics more comparable across fields. We use PageRank as an example metric and examine the extent to which field-specific citation norms drive estimated importance differences. In doing so, we recapitulate differences in journal and article PageRanks between fields. We also find that manuscripts shared between fields have different PageRanks depending on which field’s citation network the metric is calculated in. We implement a degree-preserving graph shuffling algorithm to generate a null distribution of similar networks and find differences more likely attributed to field-specific preferences than citation norms. Our results suggest that while differences exist between fields’ metric distributions, applying metrics in a field-aware manner rather than using normalized global metrics avoids losing important information about article preferences. They also imply that assigning a single importance value to a manuscript may not be a useful construct, as the importance of each manuscript varies by the reader’s field.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Funded by The Gordon and Betty Moore Foundation (GBMF4552)

  • Funded by The Gordon and Betty Moore Foundation (GBMF4552); The National Human Genome Research Institute (R01 HG10067)

  • ben-heil · autobencoder

  • cgreene · greenescientist

  • https://github.com/greenelab/indices

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted January 06, 2023.
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The Field-Dependent Nature of PageRank Values in Citation Networks
Benjamin J. Heil, Casey S. Greene
bioRxiv 2023.01.05.522943; doi: https://doi.org/10.1101/2023.01.05.522943
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The Field-Dependent Nature of PageRank Values in Citation Networks
Benjamin J. Heil, Casey S. Greene
bioRxiv 2023.01.05.522943; doi: https://doi.org/10.1101/2023.01.05.522943

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