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Defective transfer of parental histone decreases frequency of homologous recombination in budding yeast

Srinivasu Karri, Yi Yang, Jiaqi Zhou, Quinn Dickson, Zhiquan Wang, Haiyun Gan, View ORCID ProfileChuanhe Yu
doi: https://doi.org/10.1101/2023.01.10.523501
Srinivasu Karri
1Hormel Institute, University of Minnesota, Austin, MN 55912 USA
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Yi Yang
1Hormel Institute, University of Minnesota, Austin, MN 55912 USA
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Jiaqi Zhou
2CAS Key Laboratory of Quantitative Engineering Biology, Guangdong Provincial Key Laboratory of Synthetic Genomics and Shenzhen Key Laboratory of Synthetic Genomics, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China
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Quinn Dickson
1Hormel Institute, University of Minnesota, Austin, MN 55912 USA
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Zhiquan Wang
3Division of Hematology, Department of Medicine, Mayo Clinic, Rochester, MN, 55905 USA
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Haiyun Gan
2CAS Key Laboratory of Quantitative Engineering Biology, Guangdong Provincial Key Laboratory of Synthetic Genomics and Shenzhen Key Laboratory of Synthetic Genomics, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China
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  • For correspondence: yu000479@umn.edu hy.gan@siat.ac.cn
Chuanhe Yu
1Hormel Institute, University of Minnesota, Austin, MN 55912 USA
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  • ORCID record for Chuanhe Yu
  • For correspondence: yu000479@umn.edu hy.gan@siat.ac.cn
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Abstract

Recycling of parental histones is an important step in epigenetic inheritance. During DNA replication, DNA polymerase epsilon subunit DPB3/DPB4 and DNA replication helicase subunit MCM2 are involved in the transfer of parental histones to the leading and lagging DNA strands, respectively. Single Dpb3 deletion (dpb3Δ) or Mcm2 mutation (mcm2-3A), which each disrupt one parental histone transfer pathway, leads to the other’s predominance. However, the impact of the two histone transfer pathways on chromatin structure and DNA repair remains elusive. In this study, we used budding yeast Saccharomyces cerevisiae to determine the genetic and epigenetic outcomes from disruption of parental histone H3-H4 tetramer transfer. We found that a dpb3Δ/mcm2-3A double mutant did not exhibit the single dpb3Δ and mcm2-3A mutants’ asymmetric parental histone patterns, suggesting that the processes by which parental histones are transferred to the leading and lagging strands are independent. Surprisingly, the frequency of homologous recombination was significantly lower in dpb3Δ, mcm2-3A, and dpb3Δ/mcm2-3A mutants relative to the wild-type strain, likely due to the elevated levels of free histones detected in the mutant cells. Together, these findings indicate that proper transfer of parental histones to the leading and lagging strands during DNA replication is essential for maintaining chromatin structure and that high levels of free histones due to parental histone transfer defects are detrimental to cells.

Competing Interest Statement

The authors have declared no competing interest.

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Posted January 11, 2023.
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Defective transfer of parental histone decreases frequency of homologous recombination in budding yeast
Srinivasu Karri, Yi Yang, Jiaqi Zhou, Quinn Dickson, Zhiquan Wang, Haiyun Gan, Chuanhe Yu
bioRxiv 2023.01.10.523501; doi: https://doi.org/10.1101/2023.01.10.523501
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Defective transfer of parental histone decreases frequency of homologous recombination in budding yeast
Srinivasu Karri, Yi Yang, Jiaqi Zhou, Quinn Dickson, Zhiquan Wang, Haiyun Gan, Chuanhe Yu
bioRxiv 2023.01.10.523501; doi: https://doi.org/10.1101/2023.01.10.523501

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