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TGFB1 Induces Fetal Reprogramming and Enhances Intestinal Regeneration

Lei Chen, Abigail Dupre, Xia Qiu, Oscar Pellon-Cardenas, Katherine D. Walton, Jianming Wang, Ansu O. Perekatt, Wenwei Hu, Jason R. Spence, Michael P. Verzi
doi: https://doi.org/10.1101/2023.01.13.523825
Lei Chen
1School of Life Science and Technology, Key Laboratory of Developmental Genes and Human Disease, Southeast University, Nanjing, China
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  • For correspondence: leichen@seu.edu.cn verzi@biology.rutgers.edu
Abigail Dupre
2Department of Genetics, Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ, USA
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Xia Qiu
2Department of Genetics, Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ, USA
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Oscar Pellon-Cardenas
2Department of Genetics, Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ, USA
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Katherine D. Walton
3Department of Internal Medicine, Gastroenterology, University of Michigan Medical School, Ann Arbor, MI, USA
4Department of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, MI, USA
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Jianming Wang
6Department of Radiation Oncology, Rutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ, USA
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Ansu O. Perekatt
7Department of Chemistry and Chemical Biology, Stevens Institute of Technology, Hoboken, NJ, USA
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Wenwei Hu
6Department of Radiation Oncology, Rutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ, USA
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Jason R. Spence
3Department of Internal Medicine, Gastroenterology, University of Michigan Medical School, Ann Arbor, MI, USA
4Department of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, MI, USA
5Department of Biomedical Engineering, University of Michigan College of Engineering, Ann Arbor, MI, USA
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Michael P. Verzi
2Department of Genetics, Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ, USA
8Rutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ, USA
9Rutgers Center for Lipid Research, New Jersey Institute for Food, Nutrition & Health, Rutgers University, New Brunswick, NJ, USA
10Member of the NIEHS Center for Environmental Exposures and Disease (CEED), Rutgers EOHSI Piscataway, NJ, USA
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  • For correspondence: leichen@seu.edu.cn verzi@biology.rutgers.edu
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SUMMARY

The adult gut epithelium has a remarkable ability to recover from damage. To achieve cellular therapies aimed at restoring and/or replacing defective gastrointestinal tissue, it is important to understand the natural mechanisms of tissue regeneration. We employed a combination of high throughput sequencing approaches, mouse genetic models, and murine and human organoid models, and identified a role for TGFB signaling during intestinal regeneration following injury. At 2 days following irradiation (IR)-induced damage of intestinal crypts, a surge in TGFB1 expression is mediated by monocyte/macrophage cells at the location of damage. Depletion of macrophages or genetic disruption of TGFB-signaling significantly impaired the regenerative response following irradiation. Murine intestinal regeneration is also characterized by a process where a fetal transcriptional signature is induced during repair. In organoid culture, TGFB1-treatment was necessary and sufficient to induce a transcriptomic shift to the fetal-like/regenerative state. The regenerative response was enhanced by the function of mesenchymal cells, which are also primed for regeneration by TGFB1. Mechanistically, integration of ATAC-seq, scRNA-seq, and ChIP-seq suggest that a regenerative YAP-SOX9 transcriptional circuit is activated in epithelium exposed to TGFB1. Finally, pre-treatment with TGFB1 enhanced the ability of primary epithelial cultures to engraft into damaged murine colon, suggesting promise for the application of the TGFB-induced regenerative circuit in cellular therapy.

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Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted January 13, 2023.
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TGFB1 Induces Fetal Reprogramming and Enhances Intestinal Regeneration
Lei Chen, Abigail Dupre, Xia Qiu, Oscar Pellon-Cardenas, Katherine D. Walton, Jianming Wang, Ansu O. Perekatt, Wenwei Hu, Jason R. Spence, Michael P. Verzi
bioRxiv 2023.01.13.523825; doi: https://doi.org/10.1101/2023.01.13.523825
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TGFB1 Induces Fetal Reprogramming and Enhances Intestinal Regeneration
Lei Chen, Abigail Dupre, Xia Qiu, Oscar Pellon-Cardenas, Katherine D. Walton, Jianming Wang, Ansu O. Perekatt, Wenwei Hu, Jason R. Spence, Michael P. Verzi
bioRxiv 2023.01.13.523825; doi: https://doi.org/10.1101/2023.01.13.523825

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